BLASTX nr result

ID: Atractylodes21_contig00023609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023609
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis...   223   2e-56
ref|XP_002270173.1| PREDICTED: transcription elongation factor S...   223   3e-56
ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|1...   221   1e-55
ref|XP_004145631.1| PREDICTED: transcription elongation factor S...   220   2e-55
ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|2...   218   1e-54

>ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis]
           gi|223548167|gb|EEF49659.1| suppressor of ty, putative
           [Ricinus communis]
          Length = 116

 Score =  223 bits (569), Expect = 2e-56
 Identities = 101/109 (92%), Positives = 105/109 (96%)
 Frame = -2

Query: 681 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDNERVADCTTPNFTGIISV 502
           AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDED+ERV DCTTPNF GIISV
Sbjct: 6   AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65

Query: 501 MDPARSWAARWLRIGKYVPGCYTLAVSEALPEDLQGICEEERVQYNPPK 355
           MDP RSWAARWLRIG++VPGCYTLAVSEALPEDLQ +CEEERVQYNPPK
Sbjct: 66  MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQALCEEERVQYNPPK 114


>ref|XP_002270173.1| PREDICTED: transcription elongation factor SPT4 homolog 2 [Vitis
           vinifera] gi|297742714|emb|CBI35348.3| unnamed protein
           product [Vitis vinifera]
          Length = 114

 Score =  223 bits (568), Expect = 3e-56
 Identities = 101/113 (89%), Positives = 108/113 (95%)
 Frame = -2

Query: 693 MTTAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDNERVADCTTPNFTG 514
           M+ AAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDED+ERV DCTTPNF G
Sbjct: 1   MSNAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNG 60

Query: 513 IISVMDPARSWAARWLRIGKYVPGCYTLAVSEALPEDLQGICEEERVQYNPPK 355
           IIS+MDP+RSWAARWLRIG++VPGCYTLAVSEALPEDLQ +CEEERVQY PPK
Sbjct: 61  IISMMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEEERVQYVPPK 113


>ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|118489920|gb|ABK96757.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222864401|gb|EEF01532.1| predicted protein [Populus
           trichocarpa]
          Length = 116

 Score =  221 bits (562), Expect = 1e-55
 Identities = 100/112 (89%), Positives = 107/112 (95%)
 Frame = -2

Query: 690 TTAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDNERVADCTTPNFTGI 511
           + AAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDED+ERV DCTTPNFTGI
Sbjct: 3   SAAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFTGI 62

Query: 510 ISVMDPARSWAARWLRIGKYVPGCYTLAVSEALPEDLQGICEEERVQYNPPK 355
           ISVMDP+RSWAARWLRIG++VPGCYTLAVSEALPEDLQ +CE+ERV Y PPK
Sbjct: 63  ISVMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVPYIPPK 114


>ref|XP_004145631.1| PREDICTED: transcription elongation factor SPT4 homolog 2-like
           [Cucumis sativus]
          Length = 116

 Score =  220 bits (561), Expect = 2e-55
 Identities = 100/109 (91%), Positives = 105/109 (96%)
 Frame = -2

Query: 681 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDNERVADCTTPNFTGIISV 502
           AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDED+ERV +CTTPNF GIISV
Sbjct: 6   AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVECTTPNFNGIISV 65

Query: 501 MDPARSWAARWLRIGKYVPGCYTLAVSEALPEDLQGICEEERVQYNPPK 355
           MDPARSWAARWLRIG++VPGCYTLAVSEALPEDLQ +CEEERVQY PPK
Sbjct: 66  MDPARSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEEERVQYAPPK 114


>ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|222850733|gb|EEE88280.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  218 bits (554), Expect = 1e-54
 Identities = 99/112 (88%), Positives = 106/112 (94%)
 Frame = -2

Query: 690 TTAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDNERVADCTTPNFTGI 511
           + AAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC FFKMDED+ERV DCTTPNFTGI
Sbjct: 3   SAAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMDEDHERVVDCTTPNFTGI 62

Query: 510 ISVMDPARSWAARWLRIGKYVPGCYTLAVSEALPEDLQGICEEERVQYNPPK 355
           ISVMDP+RSWAARWLRIG++VPGCYTLAVSEALPEDLQ +CE+ERV Y PPK
Sbjct: 63  ISVMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVPYIPPK 114


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