BLASTX nr result

ID: Atractylodes21_contig00023598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023598
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266109.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   290   2e-76
ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max] gi|3...   289   5e-76
ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum l...   287   2e-75
gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum t...   287   2e-75
gb|ACU18555.1| unknown [Glycine max]                                  286   3e-75

>ref|XP_002266109.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|296084140|emb|CBI24528.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  290 bits (742), Expect = 2e-76
 Identities = 143/151 (94%), Positives = 147/151 (97%)
 Frame = -2

Query: 653 MGRMHSGGKGISASAKPYKRSPPTWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 474
           MGRMHS GKGIS+SA PYKR+PPTWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPTWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 473 AQVNSVTGSKILRILKGHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 294
           AQV SVTGSKILR+LKGHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRVLKGHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 293 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 201
           RIHRL RYYK+TKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLGRYYKRTKKLPPVWKYESTTASTLVA 151


>ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max]
           gi|356514135|ref|XP_003525762.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|356514137|ref|XP_003525763.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|356563264|ref|XP_003549884.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|54039313|sp|P62302.1|RS13_SOYBN RecName: Full=40S
           ribosomal protein S13 gi|44662862|gb|AAS47510.1|
           ribosomal protein S13 [Glycine max]
           gi|161367348|gb|ABX71080.1| ribosomal protein S13
           [Glycine max] gi|255625887|gb|ACU13288.1| unknown
           [Glycine max]
          Length = 151

 Score =  289 bits (739), Expect = 5e-76
 Identities = 143/151 (94%), Positives = 148/151 (98%)
 Frame = -2

Query: 653 MGRMHSGGKGISASAKPYKRSPPTWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 474
           MGRMHS GKGIS+SA PYKR+PP+WLKISSQDVE+NICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 473 AQVNSVTGSKILRILKGHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 294
           AQVNSVTGSKILRILK HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 293 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 201
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum lycopersicum]
           gi|68449762|gb|AAY97868.1| cytoplasmic ribosomal protein
           S13 [Solanum lycopersicum]
          Length = 151

 Score =  287 bits (734), Expect = 2e-75
 Identities = 143/151 (94%), Positives = 146/151 (96%)
 Frame = -2

Query: 653 MGRMHSGGKGISASAKPYKRSPPTWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 474
           MGRMHS GKGISASA PYKR+PP+WLKIS+ DVEDNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRAPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 473 AQVNSVTGSKILRILKGHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 294
           AQV SVTGSKILRILK HGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 293 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 201
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum tuberosum]
          Length = 151

 Score =  287 bits (734), Expect = 2e-75
 Identities = 143/151 (94%), Positives = 146/151 (96%)
 Frame = -2

Query: 653 MGRMHSGGKGISASAKPYKRSPPTWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 474
           MGRMHS GKGISASA PYKR+PP+WLKIS+ DVEDNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 473 AQVNSVTGSKILRILKGHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 294
           AQV SVTGSKILRILK HGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 293 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 201
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>gb|ACU18555.1| unknown [Glycine max]
          Length = 151

 Score =  286 bits (732), Expect = 3e-75
 Identities = 142/151 (94%), Positives = 147/151 (97%)
 Frame = -2

Query: 653 MGRMHSGGKGISASAKPYKRSPPTWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 474
           MGRMHS  KGIS+SA PYKR+PP+WLKISSQDVE+NICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRDKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 473 AQVNSVTGSKILRILKGHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 294
           AQVNSVTGSKILRILK HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 293 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 201
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


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