BLASTX nr result

ID: Atractylodes21_contig00023581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023581
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309350.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-09
ref|XP_002324537.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-09
ref|XP_003610309.1| Signal recognition particle receptor subunit...    61   1e-08
ref|XP_002529394.1| signal recognition particle receptor alpha s...    61   1e-08
ref|XP_003549540.1| PREDICTED: signal recognition particle recep...    61   2e-08

>ref|XP_002309350.1| predicted protein [Populus trichocarpa] gi|222855326|gb|EEE92873.1|
           predicted protein [Populus trichocarpa]
          Length = 624

 Score = 62.4 bits (150), Expect(2) = 6e-09
 Identities = 32/45 (71%), Positives = 35/45 (77%)
 Frame = -2

Query: 258 VSPSPSTRFIDGIFLTKFDTIYDKVGFALSLVCISGSPFMFVSYG 124
           +S SP+ R IDGI LTKFDTI DKVG ALS+V ISGSP MFV  G
Sbjct: 560 LSTSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCG 604



 Score = 22.7 bits (47), Expect(2) = 6e-09
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -1

Query: 349 VDQLSKFNQVL 317
           VDQLSKFNQ L
Sbjct: 547 VDQLSKFNQKL 557


>ref|XP_002324537.1| predicted protein [Populus trichocarpa] gi|222865971|gb|EEF03102.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score = 62.4 bits (150), Expect(2) = 6e-09
 Identities = 32/45 (71%), Positives = 35/45 (77%)
 Frame = -2

Query: 258 VSPSPSTRFIDGIFLTKFDTIYDKVGFALSLVCISGSPFMFVSYG 124
           +S SP+ R IDGI LTKFDTI DKVG ALS+V ISGSP MFV  G
Sbjct: 248 LSTSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCG 292



 Score = 22.7 bits (47), Expect(2) = 6e-09
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -1

Query: 349 VDQLSKFNQVL 317
           VDQLSKFNQ L
Sbjct: 235 VDQLSKFNQKL 245


>ref|XP_003610309.1| Signal recognition particle receptor subunit alpha [Medicago
           truncatula] gi|355511364|gb|AES92506.1| Signal
           recognition particle receptor subunit alpha [Medicago
           truncatula]
          Length = 631

 Score = 61.2 bits (147), Expect(2) = 1e-08
 Identities = 31/45 (68%), Positives = 35/45 (77%)
 Frame = -2

Query: 258 VSPSPSTRFIDGIFLTKFDTIYDKVGFALSLVCISGSPFMFVSYG 124
           +S SP+ R IDGI LTKFDTI DKVG ALS+V ISG+P MFV  G
Sbjct: 567 LSTSPTPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCG 611



 Score = 22.7 bits (47), Expect(2) = 1e-08
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -1

Query: 349 VDQLSKFNQVL 317
           VDQLSKFNQ L
Sbjct: 554 VDQLSKFNQKL 564


>ref|XP_002529394.1| signal recognition particle receptor alpha subunit, putative
           [Ricinus communis] gi|223531142|gb|EEF32990.1| signal
           recognition particle receptor alpha subunit, putative
           [Ricinus communis]
          Length = 618

 Score = 61.2 bits (147), Expect(2) = 1e-08
 Identities = 31/45 (68%), Positives = 35/45 (77%)
 Frame = -2

Query: 258 VSPSPSTRFIDGIFLTKFDTIYDKVGFALSLVCISGSPFMFVSYG 124
           +S SP+ R IDGI LTKFDTI DKVG ALS+V ISG+P MFV  G
Sbjct: 554 LSTSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCG 598



 Score = 22.7 bits (47), Expect(2) = 1e-08
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -1

Query: 349 VDQLSKFNQVL 317
           VDQLSKFNQ L
Sbjct: 541 VDQLSKFNQKL 551


>ref|XP_003549540.1| PREDICTED: signal recognition particle receptor subunit alpha-like
           [Glycine max]
          Length = 626

 Score = 60.8 bits (146), Expect(2) = 2e-08
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = -2

Query: 258 VSPSPSTRFIDGIFLTKFDTIYDKVGFALSLVCISGSPFMFVSYG 124
           +S SP+ R IDGI LTKFDTI DKVG ALS+V +SG+P MFV  G
Sbjct: 562 LSTSPTPRLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 606



 Score = 22.7 bits (47), Expect(2) = 2e-08
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -1

Query: 349 VDQLSKFNQVL 317
           VDQLSKFNQ L
Sbjct: 549 VDQLSKFNQKL 559


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