BLASTX nr result

ID: Atractylodes21_contig00023548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023548
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285659.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   338   1e-90
ref|XP_002534375.1| Ubiquitin ligase SINAT2, putative [Ricinus c...   332   9e-89
emb|CAN66717.1| hypothetical protein VITISV_039358 [Vitis vinifera]   330   3e-88
ref|XP_002876454.1| seven in absentia family protein [Arabidopsi...   325   7e-87
ref|NP_191363.1| E3 ubiquitin-protein ligase SINAT2 [Arabidopsis...   325   7e-87

>ref|XP_002285659.1| PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Vitis vinifera]
           gi|297746416|emb|CBI16472.3| unnamed protein product
           [Vitis vinifera]
          Length = 308

 Score =  338 bits (866), Expect = 1e-90
 Identities = 150/222 (67%), Positives = 176/222 (79%), Gaps = 5/222 (2%)
 Frame = +1

Query: 235 MGPGGNIYQDVTESRG---DYGIKSSNVEGRSC--LRLCGSAGGRQGMASNSAVHELLEC 399
           M PGG I ++V ESR    DY + ++N+E RS    +     GG+ GM S S VHELLEC
Sbjct: 1   MAPGGGICKEVCESRSAFADYDVTTANLELRSSPFRKATTGVGGKHGMPSTSGVHELLEC 60

Query: 400 PVCLSIMHPPIHQCPNGHTICVVCKSKVKNSCPICRQELGNIRCLALEKVAESIELPCKY 579
           PVC+ +MHPPIHQCPNGHT+C  CK++V N CP CR ELGNIRCLALEK+AES+ELPC+Y
Sbjct: 61  PVCMDLMHPPIHQCPNGHTLCSNCKARVHNCCPTCRFELGNIRCLALEKIAESLELPCRY 120

Query: 580 HYLGCQDIFPYHSRIRHEENCKYRGYNCPYAGTECYVTGDIPFLVAHLKADHNVDMHDGS 759
              GC DIFPY+S+++HE+NC++R Y+CPYAG EC VTGDIP LV HLK DH VDMHDG 
Sbjct: 121 QIFGCHDIFPYYSKLKHEQNCQFRPYSCPYAGAECSVTGDIPLLVMHLKDDHKVDMHDGC 180

Query: 760 TFNHRYVKPNPHEIENATWMLTIFNCFGYQFCLHFEAFHLGM 885
           TFNHRYVK NP E+ENATWMLT+FNCFG QFCLHFEAFHLGM
Sbjct: 181 TFNHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFHLGM 222


>ref|XP_002534375.1| Ubiquitin ligase SINAT2, putative [Ricinus communis]
           gi|223525415|gb|EEF28013.1| Ubiquitin ligase SINAT2,
           putative [Ricinus communis]
          Length = 304

 Score =  332 bits (850), Expect = 9e-89
 Identities = 147/220 (66%), Positives = 177/220 (80%), Gaps = 3/220 (1%)
 Frame = +1

Query: 235 MGPGGNIYQDVTESR---GDYGIKSSNVEGRSCLRLCGSAGGRQGMASNSAVHELLECPV 405
           M PGG+  ++V ES     DY I ++  E  S +      GG+QG+ SN+ VHELLECPV
Sbjct: 1   MAPGGSACKEVLESHPAISDYEIGTAKTENNSTVTK--GLGGKQGLYSNNGVHELLECPV 58

Query: 406 CLSIMHPPIHQCPNGHTICVVCKSKVKNSCPICRQELGNIRCLALEKVAESIELPCKYHY 585
           C ++M+PPIHQCPNGHT+C  CKS+V N CP CR +LGNIRCLALEKVAES+ELPCKY  
Sbjct: 59  CTNLMYPPIHQCPNGHTLCSNCKSRVHNCCPTCRYDLGNIRCLALEKVAESLELPCKYQD 118

Query: 586 LGCQDIFPYHSRIRHEENCKYRGYNCPYAGTECYVTGDIPFLVAHLKADHNVDMHDGSTF 765
           LGC DIFPY+S+++HE++C++R Y+CPYAG+EC +TGDIP LVAHLK DH VDMHDG TF
Sbjct: 119 LGCHDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPTLVAHLKDDHKVDMHDGCTF 178

Query: 766 NHRYVKPNPHEIENATWMLTIFNCFGYQFCLHFEAFHLGM 885
           NHRYVK NPHE+ENATWMLT+FNCFG QFCLHFEAF +GM
Sbjct: 179 NHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQIGM 218


>emb|CAN66717.1| hypothetical protein VITISV_039358 [Vitis vinifera]
          Length = 308

 Score =  330 bits (846), Expect = 3e-88
 Identities = 147/222 (66%), Positives = 172/222 (77%), Gaps = 5/222 (2%)
 Frame = +1

Query: 235 MGPGGNIYQDVTESRG---DYGIKSSNVEGRSC--LRLCGSAGGRQGMASNSAVHELLEC 399
           M PGG I ++V ESR    DY + ++N+E RS    +     GG+ G  S S VHELLEC
Sbjct: 1   MAPGGGICKEVCESRSAFADYDVTTANLELRSSPFRKATTGVGGKHGXPSTSGVHELLEC 60

Query: 400 PVCLSIMHPPIHQCPNGHTICVVCKSKVKNSCPICRQELGNIRCLALEKVAESIELPCKY 579
           PVC+ +MHPPIHQCPNGHT+C  CK++V N CP CR ELGNIRCLAL K+AES+E PC+Y
Sbjct: 61  PVCMDLMHPPIHQCPNGHTLCSNCKARVHNCCPTCRFELGNIRCLALVKIAESLEFPCRY 120

Query: 580 HYLGCQDIFPYHSRIRHEENCKYRGYNCPYAGTECYVTGDIPFLVAHLKADHNVDMHDGS 759
              GC DIFPY+S+++HE NC++R Y+CPYAG EC VTGDIP LV HLK DH VDMHDG 
Sbjct: 121 QIFGCHDIFPYYSKLKHEXNCQFRPYSCPYAGAECSVTGDIPLLVMHLKDDHKVDMHDGC 180

Query: 760 TFNHRYVKPNPHEIENATWMLTIFNCFGYQFCLHFEAFHLGM 885
           TFNHRYVK NP E+ENATWMLT+FNCFG QFCLHFEAFHLGM
Sbjct: 181 TFNHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFHLGM 222


>ref|XP_002876454.1| seven in absentia family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322292|gb|EFH52713.1| seven in absentia family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score =  325 bits (834), Expect = 7e-87
 Identities = 147/223 (65%), Positives = 180/223 (80%), Gaps = 6/223 (2%)
 Frame = +1

Query: 235 MGPGGNIYQDVTESRG---DYGIKSSNVEGRSCLRLC--GSAG-GRQGMASNSAVHELLE 396
           M PGG+  ++V ES     DY +K++ VE  +  +    GSAG G+ G+ SN+ V+ELLE
Sbjct: 1   MAPGGSALKEVMESNSTGMDYEVKTAKVEVNNNNKPTKPGSAGIGKYGIHSNNGVYELLE 60

Query: 397 CPVCLSIMHPPIHQCPNGHTICVVCKSKVKNSCPICRQELGNIRCLALEKVAESIELPCK 576
           CPVC ++M+PPIHQCPNGHT+C  CK +V+N+CP CR ELGNIRCLALEKVAES+E+PC+
Sbjct: 61  CPVCTNLMYPPIHQCPNGHTLCSNCKVRVQNTCPTCRYELGNIRCLALEKVAESLEVPCR 120

Query: 577 YHYLGCQDIFPYHSRIRHEENCKYRGYNCPYAGTECYVTGDIPFLVAHLKADHNVDMHDG 756
           Y  LGC DIFPY+S+++HE++C++R Y CPYAG+EC VTGDIP LV HLK DH VDMHDG
Sbjct: 121 YQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECAVTGDIPTLVVHLKDDHKVDMHDG 180

Query: 757 STFNHRYVKPNPHEIENATWMLTIFNCFGYQFCLHFEAFHLGM 885
            TFNHRYVK NPHE+ENATWMLT+FNCFG QFCLHFEAF LGM
Sbjct: 181 CTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGM 223


>ref|NP_191363.1| E3 ubiquitin-protein ligase SINAT2 [Arabidopsis thaliana]
           gi|46577554|sp|Q9M2P4.1|SINA2_ARATH RecName: Full=E3
           ubiquitin-protein ligase SINAT2; AltName: Full=Seven in
           absentia homolog 2 gi|6729547|emb|CAB67632.1| putative
           protein [Arabidopsis thaliana]
           gi|21593355|gb|AAM65304.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|105830184|gb|ABF74716.1| At3g58040 [Arabidopsis
           thaliana] gi|332646214|gb|AEE79735.1| E3
           ubiquitin-protein ligase SINAT2 [Arabidopsis thaliana]
          Length = 308

 Score =  325 bits (834), Expect = 7e-87
 Identities = 147/222 (66%), Positives = 179/222 (80%), Gaps = 5/222 (2%)
 Frame = +1

Query: 235 MGPGGNIYQDVTESRG---DYGIKSSNVE-GRSCLRLCGSAG-GRQGMASNSAVHELLEC 399
           M PGG+  ++V ES     DY +K++ VE   +     GSAG G+ G+ SN+ V+ELLEC
Sbjct: 1   MAPGGSALKEVMESNSTGMDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLEC 60

Query: 400 PVCLSIMHPPIHQCPNGHTICVVCKSKVKNSCPICRQELGNIRCLALEKVAESIELPCKY 579
           PVC ++M+PPIHQCPNGHT+C  CK +V+N+CP CR ELGNIRCLALEKVAES+E+PC+Y
Sbjct: 61  PVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRY 120

Query: 580 HYLGCQDIFPYHSRIRHEENCKYRGYNCPYAGTECYVTGDIPFLVAHLKADHNVDMHDGS 759
             LGC DIFPY+S+++HE++C++R Y CPYAG+EC VTGDIP LV HLK DH VDMHDG 
Sbjct: 121 QNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGC 180

Query: 760 TFNHRYVKPNPHEIENATWMLTIFNCFGYQFCLHFEAFHLGM 885
           TFNHRYVK NPHE+ENATWMLT+FNCFG QFCLHFEAF LGM
Sbjct: 181 TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGM 222


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