BLASTX nr result

ID: Atractylodes21_contig00023547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023547
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75314.1| hypothetical protein VITISV_028740 [Vitis vinifera]    50   3e-11
ref|XP_002271878.2| PREDICTED: uracil-DNA glycosylase [Vitis vin...    49   7e-11
emb|CBI27448.3| unnamed protein product [Vitis vinifera]               49   7e-11
ref|XP_002521497.1| uracil DNA glycosylase, putative [Ricinus co...    48   2e-10
ref|NP_188493.1| uracil dna glycosylase [Arabidopsis thaliana] g...    48   7e-10

>emb|CAN75314.1| hypothetical protein VITISV_028740 [Vitis vinifera]
          Length = 281

 Score = 50.1 bits (118), Expect(2) = 3e-11
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = -3

Query: 543 EGWDFLKLEELLVEETWLKPLAGEFQYPCAKKLSEFIE 430
           EG  F++LE+LLVEETWL  L GEFQ P AK L  F+E
Sbjct: 88  EGVGFVELEDLLVEETWLDALPGEFQKPYAKTLCRFLE 125



 Score = 44.7 bits (104), Expect(2) = 3e-11
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = -1

Query: 410 P*HLIFNARNSTPLDKVKAIIIGQD 336
           P HLIFNA NSTP D+VKA+IIGQD
Sbjct: 138 PQHLIFNALNSTPFDRVKAVIIGQD 162


>ref|XP_002271878.2| PREDICTED: uracil-DNA glycosylase [Vitis vinifera]
          Length = 328

 Score = 48.9 bits (115), Expect(2) = 7e-11
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = -3

Query: 543 EGWDFLKLEELLVEETWLKPLAGEFQYPCAKKLSEFIE 430
           EG  F++LE+LL+EETWL  L GEFQ P AK L  F+E
Sbjct: 97  EGVGFVELEDLLLEETWLDALPGEFQKPYAKTLCRFLE 134



 Score = 44.7 bits (104), Expect(2) = 7e-11
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = -1

Query: 410 P*HLIFNARNSTPLDKVKAIIIGQD 336
           P HLIFNA NSTP D+VKA+IIGQD
Sbjct: 147 PQHLIFNALNSTPFDRVKAVIIGQD 171


>emb|CBI27448.3| unnamed protein product [Vitis vinifera]
          Length = 321

 Score = 48.9 bits (115), Expect(2) = 7e-11
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = -3

Query: 543 EGWDFLKLEELLVEETWLKPLAGEFQYPCAKKLSEFIE 430
           EG  F++LE+LL+EETWL  L GEFQ P AK L  F+E
Sbjct: 90  EGVGFVELEDLLLEETWLDALPGEFQKPYAKTLCRFLE 127



 Score = 44.7 bits (104), Expect(2) = 7e-11
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = -1

Query: 410 P*HLIFNARNSTPLDKVKAIIIGQD 336
           P HLIFNA NSTP D+VKA+IIGQD
Sbjct: 140 PQHLIFNALNSTPFDRVKAVIIGQD 164


>ref|XP_002521497.1| uracil DNA glycosylase, putative [Ricinus communis]
           gi|223539294|gb|EEF40886.1| uracil DNA glycosylase,
           putative [Ricinus communis]
          Length = 332

 Score = 47.8 bits (112), Expect(2) = 2e-10
 Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = -3

Query: 588 NLNHL*Y**NPICL---GEGWDFLKLEELLVEETWLKPLAGEFQYPCAKKLSEFIE 430
           NLNH        CL        ++KLEELLVEETW++ L GE Q P AK L +FIE
Sbjct: 63  NLNH--------CLQLVSNSKSYVKLEELLVEETWVEALPGELQKPYAKTLCKFIE 110



 Score = 44.3 bits (103), Expect(2) = 2e-10
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = -1

Query: 410 P*HLIFNARNSTPLDKVKAIIIGQD 336
           P HLIFNA NSTP D++KA+IIGQD
Sbjct: 123 PQHLIFNALNSTPFDRIKAVIIGQD 147


>ref|NP_188493.1| uracil dna glycosylase [Arabidopsis thaliana]
           gi|9294324|dbj|BAB02221.1| uracil-DNA glycosylase-like
           protein [Arabidopsis thaliana]
           gi|21537176|gb|AAM61517.1| uracil-DNA glycosylase,
           putative [Arabidopsis thaliana]
           gi|115646763|gb|ABJ17110.1| At3g18630 [Arabidopsis
           thaliana] gi|332642603|gb|AEE76124.1| uracil dna
           glycosylase [Arabidopsis thaliana]
          Length = 330

 Score = 48.1 bits (113), Expect(2) = 7e-10
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = -3

Query: 543 EGWDFLKLEELLVEETWLKPLAGEFQYPCAKKLSEFIE 430
           EG  ++ L ELLVEE+WLK L GEF  P AK LS+F+E
Sbjct: 97  EGNCYVPLSELLVEESWLKALPGEFHKPYAKSLSDFLE 134



 Score = 42.0 bits (97), Expect(2) = 7e-10
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = -1

Query: 410 P*HLIFNARNSTPLDKVKAIIIGQD 336
           P HLIFNA N+TP D+VK +IIGQD
Sbjct: 149 PQHLIFNALNTTPFDRVKTVIIGQD 173


Top