BLASTX nr result

ID: Atractylodes21_contig00023517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023517
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270117.1| PREDICTED: ribulose bisphosphate carboxylase...   228   6e-58
gb|AFK34410.1| unknown [Lotus japonicus]                              210   2e-52
ref|XP_003610095.1| Ribulose bisphosphate carboxylase small chai...   208   8e-52
gb|AFK37376.1| unknown [Lotus japonicus]                              207   1e-51
ref|NP_001235868.1| uncharacterized protein LOC100527679 [Glycin...   202   3e-50

>ref|XP_002270117.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
           chloroplastic [Vitis vinifera]
           gi|297735404|emb|CBI17844.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  228 bits (582), Expect = 6e-58
 Identities = 101/133 (75%), Positives = 114/133 (85%)
 Frame = -2

Query: 403 MSVSTFTAPVTGSIYMGLKPHASKLFQTTNSMPWSRKTVSNGSRIHCMKVWNPVDNKKFE 224
           M+    + PVT   Y+GLKPH  KLF   +S+ WSRKTVSNGS+ HCMK WNP++NKKFE
Sbjct: 1   MAAGILSGPVTSFGYVGLKPHQPKLFPAKDSVAWSRKTVSNGSKTHCMKTWNPINNKKFE 60

Query: 223 TLSYLPPLTDDSIAKEIDYMMKKGWVPCLEFDTVGYVFRENSRIPNYYDGRYWTLWKLPM 44
           TLSYLPPL+DDSIAKEIDYM+KKGW+PCLEFD VGYVFR+NS+IP YYDGRYWTLWKLPM
Sbjct: 61  TLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVFRKNSQIPGYYDGRYWTLWKLPM 120

Query: 43  FGCTDASQVLNEI 5
           FGC DASQVLNEI
Sbjct: 121 FGCNDASQVLNEI 133


>gb|AFK34410.1| unknown [Lotus japonicus]
          Length = 173

 Score =  210 bits (534), Expect = 2e-52
 Identities = 92/134 (68%), Positives = 111/134 (82%)
 Frame = -2

Query: 403 MSVSTFTAPVTGSIYMGLKPHASKLFQTTNSMPWSRKTVSNGSRIHCMKVWNPVDNKKFE 224
           MS  TFTA V G+ ++GLK ++S L+  T    W  KT SNGS+  CMK WNP++N+KFE
Sbjct: 1   MSAGTFTALVAGAGFVGLKSNSSNLYPVTGFNEWRSKTTSNGSKTLCMKTWNPINNRKFE 60

Query: 223 TLSYLPPLTDDSIAKEIDYMMKKGWVPCLEFDTVGYVFRENSRIPNYYDGRYWTLWKLPM 44
           TLSYLPPLTD+SIAKE+DYM+KKGW+PCLEFD +G++ RENSR+P YYDGRYWTLWKLPM
Sbjct: 61  TLSYLPPLTDESIAKEVDYMLKKGWIPCLEFDELGHIRRENSRMPGYYDGRYWTLWKLPM 120

Query: 43  FGCTDASQVLNEIQ 2
           FGC D+SQVLNEIQ
Sbjct: 121 FGCNDSSQVLNEIQ 134


>ref|XP_003610095.1| Ribulose bisphosphate carboxylase small chain [Medicago truncatula]
           gi|355511150|gb|AES92292.1| Ribulose bisphosphate
           carboxylase small chain [Medicago truncatula]
           gi|388491552|gb|AFK33842.1| unknown [Medicago
           truncatula]
          Length = 173

 Score =  208 bits (529), Expect = 8e-52
 Identities = 94/134 (70%), Positives = 111/134 (82%), Gaps = 1/134 (0%)
 Frame = -2

Query: 403 MSVSTFTAPVTGSIYMGLKPHASKLFQT-TNSMPWSRKTVSNGSRIHCMKVWNPVDNKKF 227
           MS  TF APV G  ++GLK ++S L+ + T S+ W +KTVSNGS+IHCMK WNP++NKKF
Sbjct: 1   MSAGTFAAPVAGPGFVGLKSNSSSLWPSATYSIEWKKKTVSNGSKIHCMKTWNPINNKKF 60

Query: 226 ETLSYLPPLTDDSIAKEIDYMMKKGWVPCLEFDTVGYVFRENSRIPNYYDGRYWTLWKLP 47
           ETLSYLPPL+DDSIAKEIDYM+KK W PCLEFD  G + R NS++P YYDGRYWTLWKLP
Sbjct: 61  ETLSYLPPLSDDSIAKEIDYMLKKRWTPCLEFDEFGCIHRANSQMPGYYDGRYWTLWKLP 120

Query: 46  MFGCTDASQVLNEI 5
           MFGC D+SQVLNEI
Sbjct: 121 MFGCNDSSQVLNEI 134


>gb|AFK37376.1| unknown [Lotus japonicus]
          Length = 173

 Score =  207 bits (528), Expect = 1e-51
 Identities = 91/134 (67%), Positives = 110/134 (82%)
 Frame = -2

Query: 403 MSVSTFTAPVTGSIYMGLKPHASKLFQTTNSMPWSRKTVSNGSRIHCMKVWNPVDNKKFE 224
           MS  TFTA V G+ ++GLK ++S L+  T    W  KT SNGS+  CMK WNP++N+KFE
Sbjct: 1   MSAGTFTALVAGAGFVGLKSNSSNLYPVTGFNEWKSKTTSNGSKTLCMKTWNPINNRKFE 60

Query: 223 TLSYLPPLTDDSIAKEIDYMMKKGWVPCLEFDTVGYVFRENSRIPNYYDGRYWTLWKLPM 44
           TLSYLPPLTD+SIAKE+DYM+KKGW+PCLEFD +G++ RENSR+P YYDGRYWTLWKLPM
Sbjct: 61  TLSYLPPLTDESIAKEVDYMLKKGWIPCLEFDELGHIRRENSRMPGYYDGRYWTLWKLPM 120

Query: 43  FGCTDASQVLNEIQ 2
           F C D+SQVLNEIQ
Sbjct: 121 FDCNDSSQVLNEIQ 134


>ref|NP_001235868.1| uncharacterized protein LOC100527679 [Glycine max]
           gi|255632934|gb|ACU16821.1| unknown [Glycine max]
          Length = 172

 Score =  202 bits (515), Expect = 3e-50
 Identities = 89/133 (66%), Positives = 110/133 (82%)
 Frame = -2

Query: 403 MSVSTFTAPVTGSIYMGLKPHASKLFQTTNSMPWSRKTVSNGSRIHCMKVWNPVDNKKFE 224
           MS +TF A + G+ ++GLK ++S L  +T  + W RK VSNGS+ +CMK WNP++NKKFE
Sbjct: 1   MSAATFAAHIAGAGFVGLKSNSSNLCPSTGPIGWKRKIVSNGSKTYCMKTWNPINNKKFE 60

Query: 223 TLSYLPPLTDDSIAKEIDYMMKKGWVPCLEFDTVGYVFRENSRIPNYYDGRYWTLWKLPM 44
           TLSYLPPL+D+SIAKEIDYM+KKGW+PCLEFD +G V RENS +P YYDGRYWTLWKLPM
Sbjct: 61  TLSYLPPLSDESIAKEIDYMLKKGWIPCLEFDELGCVRRENSHMPEYYDGRYWTLWKLPM 120

Query: 43  FGCTDASQVLNEI 5
           F C+D+SQVL EI
Sbjct: 121 FACSDSSQVLKEI 133


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