BLASTX nr result

ID: Atractylodes21_contig00023487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023487
         (1232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270662.1| PREDICTED: coatomer subunit epsilon-1 isofor...   486   e-135
ref|XP_002317073.1| predicted protein [Populus trichocarpa] gi|2...   480   e-133
ref|XP_004134547.1| PREDICTED: coatomer subunit epsilon-1-like [...   475   e-131
ref|XP_002893638.1| coatomer protein epsilon subunit family prot...   474   e-131
ref|NP_174351.1| coatomer subunit epsilon-1 [Arabidopsis thalian...   471   e-130

>ref|XP_002270662.1| PREDICTED: coatomer subunit epsilon-1 isoform 1 [Vitis vinifera]
           gi|297740898|emb|CBI31080.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  486 bits (1250), Expect = e-135
 Identities = 244/286 (85%), Positives = 265/286 (92%)
 Frame = +1

Query: 79  APDLLFNLRNNFYLGAYQAAINISDIPNLSEEDSIERDCLVHRSYVALGSYQLVINEVDS 258
           APDLLF LRNNF+LGA+QAAIN SDIPNLS EDSIERDCLVHRSY+ALGSYQLVINE+DS
Sbjct: 3   APDLLFGLRNNFFLGAFQAAINNSDIPNLSPEDSIERDCLVHRSYIALGSYQLVINEIDS 62

Query: 259 SAATPLQAVKLLALYLSSPGNKESTISSIREWLGDAAIGNNPILRLIAGTIFMHEQDYNE 438
           SAATPLQAVKLLALYLSSP NKESTISS++E LGD AIGNNPILRLIAG +FMHEQDYNE
Sbjct: 63  SAATPLQAVKLLALYLSSPENKESTISSLKELLGDPAIGNNPILRLIAGIVFMHEQDYNE 122

Query: 439 ALKYTNAGGTMELYALNVHIFLKMHRSDYAEKQLRVMQQIDEDHTLTQLATAWVNLAVGG 618
           ALK+T+ GGTMEL+ALNV IFLKMHRSDYAEKQL++MQQ+DEDHTLTQLA AW+NLAVGG
Sbjct: 123 ALKHTHPGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQMDEDHTLTQLANAWLNLAVGG 182

Query: 619 SKIQEAYLIFQDFSEKYQMTSLILNGKAVSCMLMGNFDEAESFLLEALNKDAKDLETLAN 798
           SKIQEAYLIFQDFSEKYQMT LILNGKAV CM MG+FDEAES LLEALNKDAKD ETLAN
Sbjct: 183 SKIQEAYLIFQDFSEKYQMTGLILNGKAVCCMHMGHFDEAESLLLEALNKDAKDPETLAN 242

Query: 799 LVVCSLHLGKPSSRFLSQLKLSDPEHILLKRGSTAEENFDRAIQTV 936
           LVVCSLHLGK SSR+LSQLKLS P+H+L+ R S AEE FDRA+QT+
Sbjct: 243 LVVCSLHLGKQSSRYLSQLKLSHPDHVLVTRASAAEEAFDRAVQTI 288


>ref|XP_002317073.1| predicted protein [Populus trichocarpa] gi|222860138|gb|EEE97685.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  480 bits (1235), Expect = e-133
 Identities = 239/289 (82%), Positives = 267/289 (92%)
 Frame = +1

Query: 70  MAMAPDLLFNLRNNFYLGAYQAAINISDIPNLSEEDSIERDCLVHRSYVALGSYQLVINE 249
           MA APD LFNLRNNFYLGAYQAAIN SD+PNLS +D++ERD LV+RSY+AL SYQLVI+E
Sbjct: 1   MAGAPDHLFNLRNNFYLGAYQAAINTSDLPNLSPDDAVERDSLVYRSYIALASYQLVIHE 60

Query: 250 VDSSAATPLQAVKLLALYLSSPGNKESTISSIREWLGDAAIGNNPILRLIAGTIFMHEQD 429
           +D +AATPLQAVKLLALYLSSP NKESTISS++EWL D+AI NN ILRLIAG IFMHE+D
Sbjct: 61  IDDAAATPLQAVKLLALYLSSPENKESTISSLKEWLADSAIANNAILRLIAGIIFMHEED 120

Query: 430 YNEALKYTNAGGTMELYALNVHIFLKMHRSDYAEKQLRVMQQIDEDHTLTQLATAWVNLA 609
           YNEALK+TNAGGTMEL+ALNV IFLKMHRSDYAEKQLR+MQQIDEDHTLTQLATAW+NLA
Sbjct: 121 YNEALKHTNAGGTMELHALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQLATAWLNLA 180

Query: 610 VGGSKIQEAYLIFQDFSEKYQMTSLILNGKAVSCMLMGNFDEAESFLLEALNKDAKDLET 789
           VGGSKIQEAYLIFQDFSEKY MT LILNGKAV CM MGNFDEAE+ LLEALNKDAKD ET
Sbjct: 181 VGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAETLLLEALNKDAKDPET 240

Query: 790 LANLVVCSLHLGKPSSRFLSQLKLSDPEHILLKRGSTAEENFDRAIQTV 936
           LANLVVCSLH+GK SSR+LSQLKLS P+H+L+KR S+AE+NF+RA+Q+V
Sbjct: 241 LANLVVCSLHIGKSSSRYLSQLKLSHPDHVLVKRASSAEDNFERAVQSV 289


>ref|XP_004134547.1| PREDICTED: coatomer subunit epsilon-1-like [Cucumis sativus]
           gi|449490635|ref|XP_004158662.1| PREDICTED: coatomer
           subunit epsilon-1-like [Cucumis sativus]
          Length = 289

 Score =  475 bits (1222), Expect = e-131
 Identities = 239/286 (83%), Positives = 262/286 (91%)
 Frame = +1

Query: 79  APDLLFNLRNNFYLGAYQAAINISDIPNLSEEDSIERDCLVHRSYVALGSYQLVINEVDS 258
           APD LFNLRNNFYLGAYQAAIN SD+PNLS +D IERD +V RSY+ALGSYQL I+E+DS
Sbjct: 3   APDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEIDS 62

Query: 259 SAATPLQAVKLLALYLSSPGNKESTISSIREWLGDAAIGNNPILRLIAGTIFMHEQDYNE 438
           SA TPLQAVKLLALYLS P +KESTI+S++EWL D AIGNN  LRLIAG IFMHEQDYNE
Sbjct: 63  SAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDYNE 122

Query: 439 ALKYTNAGGTMELYALNVHIFLKMHRSDYAEKQLRVMQQIDEDHTLTQLATAWVNLAVGG 618
           ALK+TNAGGTMEL+ALNV IFLKMHRSDYAE+QLRVMQQIDEDHTLTQLA AW+NLAVGG
Sbjct: 123 ALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAVGG 182

Query: 619 SKIQEAYLIFQDFSEKYQMTSLILNGKAVSCMLMGNFDEAESFLLEALNKDAKDLETLAN 798
           SKIQEAYLIFQDFSEKY MTSLILNG+AV CM MGNFDEAE+ LLEALNKDAKD ETLAN
Sbjct: 183 SKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETLAN 242

Query: 799 LVVCSLHLGKPSSRFLSQLKLSDPEHILLKRGSTAEENFDRAIQTV 936
           LVVCSLHLGKP+SRFLSQLK+S P+H+L+KR STAEENFDRA+Q+V
Sbjct: 243 LVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSV 288


>ref|XP_002893638.1| coatomer protein epsilon subunit family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339480|gb|EFH69897.1| coatomer
           protein epsilon subunit family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 292

 Score =  474 bits (1219), Expect = e-131
 Identities = 231/284 (81%), Positives = 267/284 (94%)
 Frame = +1

Query: 82  PDLLFNLRNNFYLGAYQAAINISDIPNLSEEDSIERDCLVHRSYVALGSYQLVINEVDSS 261
           PD LFNLRN+FYLGAYQAAIN S+IPNLS+ED +ERDCLVHR+Y+ALGSYQLVI+E+D +
Sbjct: 7   PDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEIDEA 66

Query: 262 AATPLQAVKLLALYLSSPGNKESTISSIREWLGDAAIGNNPILRLIAGTIFMHEQDYNEA 441
           AATPLQAVKLLA+YL+SPGNKESTISS+REWL D  +GNN I+RLIAGTIFMHE+DYNEA
Sbjct: 67  AATPLQAVKLLAMYLASPGNKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDYNEA 126

Query: 442 LKYTNAGGTMELYALNVHIFLKMHRSDYAEKQLRVMQQIDEDHTLTQLATAWVNLAVGGS 621
           LK+T++GGTM+L+ALNV IF+KMHRSDYAEKQLRVMQQIDEDHTLTQLA+AW+NLAVGGS
Sbjct: 127 LKHTHSGGTMDLHALNVQIFIKMHRSDYAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGS 186

Query: 622 KIQEAYLIFQDFSEKYQMTSLILNGKAVSCMLMGNFDEAESFLLEALNKDAKDLETLANL 801
           KIQEAYLIFQDFSEKY MTSLILNGKAV CM MGNF+EAE+ LLEALNKDAKD ETLANL
Sbjct: 187 KIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETLANL 246

Query: 802 VVCSLHLGKPSSRFLSQLKLSDPEHILLKRGSTAEENFDRAIQT 933
           VVCSLH+GK SSR+L+QLKLS PEH+L+KR ++AE+NF+RA+Q+
Sbjct: 247 VVCSLHVGKSSSRYLNQLKLSHPEHVLVKRVASAEDNFERALQS 290


>ref|NP_174351.1| coatomer subunit epsilon-1 [Arabidopsis thaliana]
           gi|75336896|sp|Q9SA78.1|COPE1_ARATH RecName:
           Full=Coatomer subunit epsilon-1; AltName:
           Full=Epsilon-coat protein 1; Short=Epsilon-COP 1
           gi|4587519|gb|AAD25750.1|AC007060_8 Strong similarity to
           F19I3.7 gi|3033380 putative coatomer epsilon subunit
           from Arabidopsis thaliana BAC gb|AC004238. ESTs
           gb|Z17908, gb|AA728673, gb|N96555, gb|H76335,
           gb|AA712463, gb|W43247, gb|T45611, gb|T21160, gb|T14119
           and AI100483 come from this gene [Arabidopsis thaliana]
           gi|13194794|gb|AAK15559.1|AF348588_1 putative coatomer
           protein, epsilon subunit [Arabidopsis thaliana]
           gi|13878125|gb|AAK44140.1|AF370325_1 putative coatomer
           protein, epsilon subunit [Arabidopsis thaliana]
           gi|17104797|gb|AAL34287.1| putative coatomer protein,
           epsilon subunit [Arabidopsis thaliana]
           gi|332193133|gb|AEE31254.1| coatomer subunit epsilon-1
           [Arabidopsis thaliana]
          Length = 292

 Score =  471 bits (1213), Expect = e-130
 Identities = 230/284 (80%), Positives = 266/284 (93%)
 Frame = +1

Query: 82  PDLLFNLRNNFYLGAYQAAINISDIPNLSEEDSIERDCLVHRSYVALGSYQLVINEVDSS 261
           PD LFNLRN+FYLGAYQAAIN S+IPNLS+ED +ERDCLVHR+Y+ALGSYQLVI+E+D +
Sbjct: 7   PDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEIDEA 66

Query: 262 AATPLQAVKLLALYLSSPGNKESTISSIREWLGDAAIGNNPILRLIAGTIFMHEQDYNEA 441
           AATPLQAVKLLA+YLSSP NKESTISS+REWL D  +GNN I+RLIAGTIFMHE+DYNEA
Sbjct: 67  AATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDYNEA 126

Query: 442 LKYTNAGGTMELYALNVHIFLKMHRSDYAEKQLRVMQQIDEDHTLTQLATAWVNLAVGGS 621
           LK+T++GGTM+L+ALNV IF+KMHRSD+AEKQLRVMQQIDEDHTLTQLA+AW+NLAVGGS
Sbjct: 127 LKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGS 186

Query: 622 KIQEAYLIFQDFSEKYQMTSLILNGKAVSCMLMGNFDEAESFLLEALNKDAKDLETLANL 801
           KIQEAYLIFQDFSEKY MTSLILNGKAV CM MGNF+EAE+ LLEALNKDAKD ETLANL
Sbjct: 187 KIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETLANL 246

Query: 802 VVCSLHLGKPSSRFLSQLKLSDPEHILLKRGSTAEENFDRAIQT 933
           VVCSLH+GK SSR+L+QLKLS PEH+L+KR ++AE+NF+RA+Q+
Sbjct: 247 VVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQS 290


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