BLASTX nr result

ID: Atractylodes21_contig00023417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023417
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   148   4e-34
ref|XP_002520726.1| potassium channel regulatory factor, putativ...   148   5e-34
gb|ACJ84802.1| unknown [Medicago truncatula]                          145   3e-33
ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   144   6e-33
ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   143   1e-32

>ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like [Vitis vinifera]
          Length = 412

 Score =  148 bits (374), Expect = 4e-34
 Identities = 80/116 (68%), Positives = 92/116 (79%), Gaps = 4/116 (3%)
 Frame = +2

Query: 2   SSNSKTESGAGSTLKTQTS----DEQKIDALNLPKQEVIRRLRFLKQPVTLFGESDDDRL 169
           S+ S   S A   L + +S    DEQKID + LPKQEVIRRLRFLKQP+TLFGE D  RL
Sbjct: 67  SATSTPSSDAKPDLTSSSSKAITDEQKIDEMVLPKQEVIRRLRFLKQPITLFGEDDTARL 126

Query: 170 DRLKYVLKAGLFELDDSEMTEGQTNDFLRDIVELKKRQKSGILSDRKRKTTEESTE 337
           DRLKYVLKAG+FE+ DS+MTEGQTNDFLRDI EL+KRQK+GILSDRKRK+ E+  E
Sbjct: 127 DRLKYVLKAGIFEV-DSDMTEGQTNDFLRDIAELRKRQKTGILSDRKRKSPEDGVE 181


>ref|XP_002520726.1| potassium channel regulatory factor, putative [Ricinus communis]
           gi|223540111|gb|EEF41688.1| potassium channel regulatory
           factor, putative [Ricinus communis]
          Length = 417

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/109 (69%), Positives = 90/109 (82%)
 Frame = +2

Query: 2   SSNSKTESGAGSTLKTQTSDEQKIDALNLPKQEVIRRLRFLKQPVTLFGESDDDRLDRLK 181
           S+ + T + A +T     ++EQ ID L LPKQEVIRRLRFLKQP+TLFGE DD RLDRLK
Sbjct: 74  STTTTTTTSAAATTSKSLTNEQNIDNLILPKQEVIRRLRFLKQPITLFGEDDDARLDRLK 133

Query: 182 YVLKAGLFELDDSEMTEGQTNDFLRDIVELKKRQKSGILSDRKRKTTEE 328
           +VLKAG+FE+ DS+MTEGQTNDFLRDI EL+KRQKSGI+S+RKRK  EE
Sbjct: 134 HVLKAGIFEV-DSDMTEGQTNDFLRDIAELRKRQKSGIVSERKRKDREE 181


>gb|ACJ84802.1| unknown [Medicago truncatula]
          Length = 268

 Score =  145 bits (367), Expect = 3e-33
 Identities = 79/111 (71%), Positives = 90/111 (81%)
 Frame = +2

Query: 2   SSNSKTESGAGSTLKTQTSDEQKIDALNLPKQEVIRRLRFLKQPVTLFGESDDDRLDRLK 181
           +S+S T + A S+      DEQ I +L LPKQEVIRRLRFLKQPVTLFGE DD RLDRLK
Sbjct: 71  ASSSVTSAAASSS--ASLPDEQNIGSLVLPKQEVIRRLRFLKQPVTLFGEDDDVRLDRLK 128

Query: 182 YVLKAGLFELDDSEMTEGQTNDFLRDIVELKKRQKSGILSDRKRKTTEEST 334
           YVLKAGLFE+ DS+MT GQTNDFLRDI EL+KRQK+GILSDRKR+  E+ T
Sbjct: 129 YVLKAGLFEV-DSDMTGGQTNDFLRDIAELRKRQKTGILSDRKRQKAEDGT 178


>ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 411

 Score =  144 bits (364), Expect = 6e-33
 Identities = 77/112 (68%), Positives = 91/112 (81%), Gaps = 3/112 (2%)
 Frame = +2

Query: 2   SSNSKTESGAGSTLKTQTS---DEQKIDALNLPKQEVIRRLRFLKQPVTLFGESDDDRLD 172
           SS+S   S A ST+ + ++   DEQ ID L LPK EVIRRLRFLKQPVTLFGE DD RLD
Sbjct: 66  SSSSTASSSASSTIASASASLTDEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLD 125

Query: 173 RLKYVLKAGLFELDDSEMTEGQTNDFLRDIVELKKRQKSGILSDRKRKTTEE 328
           RLKYVLKAG+FE+ DS+MTEGQTNDFLRDI EL+KRQK+GIL +RKR+  ++
Sbjct: 126 RLKYVLKAGVFEV-DSDMTEGQTNDFLRDIAELRKRQKTGILGERKRQKADD 176


>ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like [Cucumis sativus]
           gi|449491488|ref|XP_004158914.1| PREDICTED:
           pre-mRNA-splicing factor 18-like [Cucumis sativus]
          Length = 420

 Score =  143 bits (361), Expect = 1e-32
 Identities = 77/113 (68%), Positives = 90/113 (79%), Gaps = 4/113 (3%)
 Frame = +2

Query: 2   SSNSKTESGAGSTLKTQTS----DEQKIDALNLPKQEVIRRLRFLKQPVTLFGESDDDRL 169
           +S S T S   +   T TS    DEQ ID L LP+QEVIRRLRFLKQP+TLFGE DD RL
Sbjct: 74  ASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARL 133

Query: 170 DRLKYVLKAGLFELDDSEMTEGQTNDFLRDIVELKKRQKSGILSDRKRKTTEE 328
           DRLK+VLKAGLFE+ DS++TEGQTNDFLRDI EL+KRQK+GILS+RKR+  E+
Sbjct: 134 DRLKFVLKAGLFEV-DSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKED 185


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