BLASTX nr result

ID: Atractylodes21_contig00023410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023410
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS90324.2| 3-dehydroquinate dehydratase / shikimate dehydrog...   301   7e-80
ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate deh...   294   8e-78
emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]   294   8e-78
ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus c...   285   4e-75
ref|XP_002319583.1| dehydroquinate dehydratase/ shikimate dehydr...   283   1e-74

>gb|AAS90324.2| 3-dehydroquinate dehydratase / shikimate dehydrogenase isoform 2
           [Nicotiana tabacum]
          Length = 521

 Score =  301 bits (770), Expect = 7e-80
 Identities = 144/190 (75%), Positives = 163/190 (85%)
 Frame = -1

Query: 571 GPKFGGVLVYGSMEGNLVPGLPSVGSLREAYGVEHIDADTKVFGLISKPVSHSKGPLLHN 392
           GPKFG VLVYGS++ N VPGLP++GSLR+AYGV+ +D DTKVFGLISKPV HSKGP+LHN
Sbjct: 201 GPKFGSVLVYGSLDCNAVPGLPTLGSLRQAYGVDFMDTDTKVFGLISKPVGHSKGPILHN 260

Query: 391 PSFRHVGFNGVYVPMLVDDLKHFFNVYQSPDFAGYSVGIPYKEAVMEFCDEIHPLAQSIG 212
           P+FRHVG+NG+YVPM VDDLK FF VY SPDFAG+SVGIPYKEAV+ FCDE+ PLA+SIG
Sbjct: 261 PTFRHVGYNGIYVPMFVDDLKEFFRVYSSPDFAGFSVGIPYKEAVVSFCDEVDPLAKSIG 320

Query: 211 AVNTIVKRLSDGKLVGYNTDCEASITAIEDALKGRGLVNGEAFLPSPLTGKQFVLVXXXX 32
           AVNTI++R  DGKL+GYNTDCEASITAIEDALK  GL NG AFLPSPL GK FVLV    
Sbjct: 321 AVNTIIQRPCDGKLIGYNTDCEASITAIEDALKVNGLTNGAAFLPSPLAGKLFVLVGAGG 380

Query: 31  XXXALSFGAK 2
              AL+FGAK
Sbjct: 381 AGRALAFGAK 390


>ref|XP_002270055.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
           dehydrogenase, chloroplastic [Vitis vinifera]
           gi|298204989|emb|CBI34296.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  294 bits (752), Expect = 8e-78
 Identities = 144/188 (76%), Positives = 164/188 (87%)
 Frame = -1

Query: 565 KFGGVLVYGSMEGNLVPGLPSVGSLREAYGVEHIDADTKVFGLISKPVSHSKGPLLHNPS 386
           KFGG LVYGSMEG+ V GLP++ SLREAY V++I+ DTKVFGLISKPV HSKGP+LHNP+
Sbjct: 201 KFGGFLVYGSMEGSPVAGLPTLESLREAYKVQYINKDTKVFGLISKPVGHSKGPILHNPA 260

Query: 385 FRHVGFNGVYVPMLVDDLKHFFNVYQSPDFAGYSVGIPYKEAVMEFCDEIHPLAQSIGAV 206
           FRHV +NG+YVPMLVDDLK FF++Y SPDFAG+SVGIPYKEAV  FCDE+HPLAQSIGAV
Sbjct: 261 FRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYKEAVTGFCDELHPLAQSIGAV 320

Query: 205 NTIVKRLSDGKLVGYNTDCEASITAIEDALKGRGLVNGEAFLPSPLTGKQFVLVXXXXXX 26
           NTI++R SDGKL+GYNTDCEASITAIEDAL+ RGL NGEA L SPLTGKQFVLV      
Sbjct: 321 NTIMRRPSDGKLIGYNTDCEASITAIEDALRERGLPNGEAPLNSPLTGKQFVLVGAGGAG 380

Query: 25  XALSFGAK 2
            AL+FGA+
Sbjct: 381 RALAFGAR 388


>emb|CAN60563.1| hypothetical protein VITISV_034026 [Vitis vinifera]
          Length = 1071

 Score =  294 bits (752), Expect = 8e-78
 Identities = 144/188 (76%), Positives = 164/188 (87%)
 Frame = -1

Query: 565 KFGGVLVYGSMEGNLVPGLPSVGSLREAYGVEHIDADTKVFGLISKPVSHSKGPLLHNPS 386
           KFGG LVYGSMEG+ V GLP++ SLREAY V++I+ DTKVFGLISKPV HSKGP+LHNP+
Sbjct: 201 KFGGFLVYGSMEGSPVAGLPTLESLREAYKVQYINKDTKVFGLISKPVGHSKGPILHNPA 260

Query: 385 FRHVGFNGVYVPMLVDDLKHFFNVYQSPDFAGYSVGIPYKEAVMEFCDEIHPLAQSIGAV 206
           FRHV +NG+YVPMLVDDLK FF++Y SPDFAG+SVGIPYKEAV  FCDE+HPLAQSIGAV
Sbjct: 261 FRHVNYNGIYVPMLVDDLKEFFSIYSSPDFAGFSVGIPYKEAVTGFCDELHPLAQSIGAV 320

Query: 205 NTIVKRLSDGKLVGYNTDCEASITAIEDALKGRGLVNGEAFLPSPLTGKQFVLVXXXXXX 26
           NTI++R SDGKL+GYNTDCEASITAIEDAL+ RGL NGEA L SPLTGKQFVLV      
Sbjct: 321 NTIMRRPSDGKLIGYNTDCEASITAIEDALRERGLPNGEAPLNSPLTGKQFVLVGAGGAG 380

Query: 25  XALSFGAK 2
            AL+FGA+
Sbjct: 381 RALAFGAR 388



 Score =  165 bits (417), Expect = 6e-39
 Identities = 91/193 (47%), Positives = 123/193 (63%), Gaps = 4/193 (2%)
 Frame = -1

Query: 568  PKFGGVLVYGSMEGNLV--PGLPSVGSLREAYGVEHIDADTKVFGLISKPVSHSKGPLLH 395
            PKFGG L YG++E   +  PG P+   L + Y    I  DTKV+G+I KPV HSK PLL 
Sbjct: 752  PKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIKPDTKVYGIIGKPVGHSKSPLLF 811

Query: 394  NPSFRHVGFNGVYVPMLVDDLKHFFNVYQSPDF-AGYSVGIPYKEAVMEFCDEIHPLAQS 218
            N +F+ VG N VYV +LVDD++ FFN Y +PDF +G S  IP+KE  ++  D I P+A+ 
Sbjct: 812  NAAFKKVGLNAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPHKEVAIKCMDTIDPIARK 871

Query: 217  IGAVNTIVKRLSDGKLVGYNTDCEASITAIEDALKGRGLVNGEA-FLPSPLTGKQFVLVX 41
            IGA+N IV++  DGKL  +NTD   +I AIED L+     NG +  + SPL GK FV++ 
Sbjct: 872  IGAINNIVRK-PDGKLTAFNTDYIGAIEAIEDGLRES---NGSSPAVGSPLAGKLFVVLG 927

Query: 40   XXXXXXALSFGAK 2
                  +L++GAK
Sbjct: 928  AGGAGKSLAYGAK 940


>ref|XP_002512298.1| shikimate dehydrogenase, putative [Ricinus communis]
           gi|223548259|gb|EEF49750.1| shikimate dehydrogenase,
           putative [Ricinus communis]
          Length = 519

 Score =  285 bits (729), Expect = 4e-75
 Identities = 135/189 (71%), Positives = 161/189 (85%)
 Frame = -1

Query: 568 PKFGGVLVYGSMEGNLVPGLPSVGSLREAYGVEHIDADTKVFGLISKPVSHSKGPLLHNP 389
           PKFGG L+YGSMEG+ +PGLP++ SLREAY V +I++DTKVFGL+SKPVSHSKGPLLHNP
Sbjct: 200 PKFGGSLLYGSMEGSSIPGLPTLDSLREAYKVAYINSDTKVFGLVSKPVSHSKGPLLHNP 259

Query: 388 SFRHVGFNGVYVPMLVDDLKHFFNVYQSPDFAGYSVGIPYKEAVMEFCDEIHPLAQSIGA 209
           +FRH  +NG YVPM VDDLK FF+VY SPDFAG+SVG PYKEAV+EFCDE+HPLA+SIGA
Sbjct: 260 TFRHANYNGTYVPMFVDDLKEFFSVYSSPDFAGFSVGFPYKEAVVEFCDEVHPLAKSIGA 319

Query: 208 VNTIVKRLSDGKLVGYNTDCEASITAIEDALKGRGLVNGEAFLPSPLTGKQFVLVXXXXX 29
           VNTI++R  DGKL+G+NTDCEA+ITAIEDALK +G ++G     SPLTG+QFVLV     
Sbjct: 320 VNTIIRRPGDGKLIGHNTDCEAAITAIEDALKEQGYMDGRTSSNSPLTGRQFVLVGAGGA 379

Query: 28  XXALSFGAK 2
             AL+FGAK
Sbjct: 380 GRALAFGAK 388


>ref|XP_002319583.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa] gi|222857959|gb|EEE95506.1| dehydroquinate
           dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa]
          Length = 518

 Score =  283 bits (725), Expect = 1e-74
 Identities = 135/189 (71%), Positives = 160/189 (84%)
 Frame = -1

Query: 568 PKFGGVLVYGSMEGNLVPGLPSVGSLREAYGVEHIDADTKVFGLISKPVSHSKGPLLHNP 389
           PKFGG LVYG+MEGN +PGLP++ SLREAY VE+I++DTKVFGL+SKPVSHSKGP+LHNP
Sbjct: 200 PKFGGALVYGAMEGNSIPGLPTLDSLREAYKVENINSDTKVFGLVSKPVSHSKGPILHNP 259

Query: 388 SFRHVGFNGVYVPMLVDDLKHFFNVYQSPDFAGYSVGIPYKEAVMEFCDEIHPLAQSIGA 209
           +FRH  FNG+YVPM VDDLK FF VY SPDFAGYSVG PYKEAV++FCDE+HPLA+SIGA
Sbjct: 260 AFRHANFNGIYVPMFVDDLKEFFEVYASPDFAGYSVGFPYKEAVVQFCDEVHPLAKSIGA 319

Query: 208 VNTIVKRLSDGKLVGYNTDCEASITAIEDALKGRGLVNGEAFLPSPLTGKQFVLVXXXXX 29
           VNTI+++ SDGKL+GYNTDCE SI +IEDALK +  +NG A L SPL GKQFV+V     
Sbjct: 320 VNTIIRKPSDGKLIGYNTDCEGSIASIEDALKDQRYING-ASLNSPLAGKQFVVVGAGGA 378

Query: 28  XXALSFGAK 2
             A++ GAK
Sbjct: 379 GRAIAVGAK 387


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