BLASTX nr result

ID: Atractylodes21_contig00023380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023380
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis ...   116   2e-24
ref|XP_002527773.1| conserved hypothetical protein [Ricinus comm...   116   2e-24
ref|XP_002315864.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|NP_001240191.1| uncharacterized protein LOC100806504 [Glycin...   101   5e-20
ref|XP_003532508.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   100   2e-19

>ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis vinifera]
          Length = 338

 Score =  116 bits (291), Expect = 2e-24
 Identities = 58/119 (48%), Positives = 78/119 (65%), Gaps = 15/119 (12%)
 Frame = -2

Query: 312 KNPNINKLHVPHCTGLTPEGIIRAVMTLNVHNTTLKSLKINGIFNIKKEQLQTLRSLLKL 133
           KNP IN+L++P CTGLTPEGI+RAV TL  H   LK ++ING++N+KKE L+TL S L++
Sbjct: 133 KNPLINRLYLPACTGLTPEGIMRAVKTLTEHYQALKCVRINGVYNMKKEHLETLSSYLQM 192

Query: 132 DQTDPETSRQE---------------ETIGSSIDVGICPKCDEVRMVFDCPSETCERKK 1
           +    E   Q+               E     ID+ ICP+C+EVRMVFDCP ETC++K+
Sbjct: 193 NPAKMEGQMQQLCFFHDHRNISVLRVEESYRPIDLEICPRCNEVRMVFDCPRETCKKKR 251


>ref|XP_002527773.1| conserved hypothetical protein [Ricinus communis]
           gi|223532808|gb|EEF34583.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 332

 Score =  116 bits (291), Expect = 2e-24
 Identities = 61/117 (52%), Positives = 83/117 (70%), Gaps = 13/117 (11%)
 Frame = -2

Query: 312 KNPNINKLHVPHCTGLTPEGIIRAVMTLNVHNTTLKSLKINGIFNIKKEQLQTLRSLLKL 133
           KNP INKLH+P CTGLTPEGII+AV  L+ H  +LKSL+INGI+N+KK+ L+TL S L++
Sbjct: 133 KNPYINKLHLPACTGLTPEGIIKAVKILSQHPNSLKSLQINGIYNLKKQHLETLYSYLQM 192

Query: 132 D--QTDPE-----------TSRQEETIGSSIDVGICPKCDEVRMVFDCPSETCERKK 1
           +  Q  P+           +SR  E+ G  +DV ICP+C+EV++VFDC  ETC +K+
Sbjct: 193 NPSQHKPQHILYHIYRISPSSRSTES-GRIVDVDICPQCNEVQIVFDCSRETCMQKR 248


>ref|XP_002315864.1| predicted protein [Populus trichocarpa] gi|222864904|gb|EEF02035.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/99 (55%), Positives = 72/99 (72%)
 Frame = -2

Query: 312 KNPNINKLHVPHCTGLTPEGIIRAVMTLNVHNTTLKSLKINGIFNIKKEQLQTLRSLLKL 133
           KN  I+KLHVP C+GLTPEGIIR V TL+ H+ +L+SL+INGI N+KKE L+T+ S L++
Sbjct: 118 KNHLISKLHVPGCSGLTPEGIIRTVKTLSQHHNSLESLQINGIHNLKKEHLETISSHLQM 177

Query: 132 DQTDPETSRQEETIGSSIDVGICPKCDEVRMVFDCPSET 16
           +       ++ + I   IDV ICPKC+EVR VFDCP  T
Sbjct: 178 N----PPHQKPQPILRMIDVDICPKCNEVRTVFDCPRAT 212


>ref|NP_001240191.1| uncharacterized protein LOC100806504 [Glycine max]
           gi|255635560|gb|ACU18130.1| unknown [Glycine max]
          Length = 278

 Score =  101 bits (252), Expect = 5e-20
 Identities = 53/120 (44%), Positives = 72/120 (60%), Gaps = 16/120 (13%)
 Frame = -2

Query: 312 KNPNINKLHVPHCTGLTPEGIIRAVMTLNVHNTTLKSLKINGIFNIKKEQLQTLRSLLKL 133
           +NP INKLH+P CTG+TPEG++ AV TL   +  LK+L INGI+NI+KE L  L   L  
Sbjct: 70  QNPLINKLHIPACTGITPEGVLGAVKTLCQRSNCLKTLSINGIYNIQKEHLDMLIMNLGK 129

Query: 132 DQTDPETSRQEETI----------------GSSIDVGICPKCDEVRMVFDCPSETCERKK 1
           +Q   E  +Q++ +                   ID+ ICP+C EVRMV+DCP E C R++
Sbjct: 130 NQPLEEQQKQQQPVYYHERCSFSVFKQEESWRLIDLEICPRCFEVRMVYDCPKEHCTRRE 189


>ref|XP_003532508.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP28-like [Glycine
           max]
          Length = 313

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 15/119 (12%)
 Frame = -2

Query: 312 KNPNINKLHVPHCTGLTPEGIIRAVMTLNVHNTTLKSLKINGIFNIKKEQLQTLRSLLKL 133
           +NP INKLH+P CTG+TP G++RAV TL   +  LK+L INGI+NI+KE L  L  ++ L
Sbjct: 110 QNPLINKLHIPACTGITPXGVLRAVKTLCQRSNCLKTLSINGIYNIQKEHLDML--IVNL 167

Query: 132 DQTDPETSRQE---------------ETIGSSIDVGICPKCDEVRMVFDCPSETCERKK 1
            +  P   +QE               E     ID+ ICP+C EVRMV+DCP   C R++
Sbjct: 168 GKNQPLEEQQEPVYYHKRCNFSVFKQEESRRLIDLEICPRCFEVRMVYDCPKGHCTRRE 226


Top