BLASTX nr result
ID: Atractylodes21_contig00023315
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00023315
(753 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 51 4e-17
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 50 1e-15
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 48 1e-14
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 45 8e-14
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 45 8e-13
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 50.8 bits (120), Expect(3) = 4e-17
Identities = 20/49 (40%), Positives = 36/49 (73%)
Frame = -3
Query: 190 EGNTIMMTNNLACKYMGIGTVRVKMFDGRTRMITNVMYVPTMSKSLISL 44
+G T++M ++ C+ G+ TV++KMFDG R +++V ++P + +SLISL
Sbjct: 324 QGGTVLMGDDTPCEVAGVETVQIKMFDGCIRTLSDVRHIPNLKRSLISL 372
Score = 47.8 bits (112), Expect(3) = 4e-17
Identities = 33/121 (27%), Positives = 61/121 (50%)
Frame = -1
Query: 744 LTSFDDLLMKMKAMGLKFED*QIAMILLCYHLEKYVALSNSLIYG*DTLTMEDVKMSLMS 565
L++F ++ +++M +K+++ + +ILLC Y ++++Y DTLT+++V +L +
Sbjct: 121 LSAFKKIVADLESMEVKYDEEDLCLILLCSLPSSYANFRDTILYSCDTLTLKEVYDALHA 180
Query: 564 EVMIGDLKDLEEDKDISSSHGLNASGQNDNKKRINNYRVHSRSRGPGNHSRSKGRGNCHY 385
+ I K + + S + GL G+ K + R S S G RSK RG
Sbjct: 181 KEKI--KKMVPSEGSNSQAEGLVVRGRQQEKNTNSKSRDKSSSSYRG---RSKSRGRYKS 235
Query: 384 C 382
C
Sbjct: 236 C 236
Score = 35.0 bits (79), Expect(3) = 4e-17
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -2
Query: 359 KERQE*STSSTATNCDVDGLVADVGLTVSLHKWILDSGASFHMTPNKECFDTLE 198
KE + + T D + LVA G + +WILD+ ++HM N++ F T E
Sbjct: 268 KEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCLNRDWFATYE 321
>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
Length = 344
Score = 50.1 bits (118), Expect(3) = 1e-15
Identities = 23/56 (41%), Positives = 37/56 (66%)
Frame = -3
Query: 190 EGNTIMMTNNLACKYMGIGTVRVKMFDGRTRMITNVMYVPTMSKSLISLGQLANVG 23
+G ++M N +ACK +GI +++KM G R +TNV +VP ++K+LI L L + G
Sbjct: 259 DGGKVLMGNKVACKVVGIHXIQIKMHGGIIRTLTNVRHVPKLNKNLIFLRTLDSNG 314
Score = 40.8 bits (94), Expect(3) = 1e-15
Identities = 31/117 (26%), Positives = 57/117 (48%)
Frame = -1
Query: 735 FDDLLMKMKAMGLKFED*QIAMILLCYHLEKYVALSNSLIYG*DTLTMEDVKMSLMSEVM 556
F+ + ++ + +K A+ L+C Y + ++YG TL ++DV+++L S +
Sbjct: 79 FNKTIXDLRNIDVKVNYEDQAIFLMCSLPNSYEHFVDIMMYGRGTLFIKDVRVALNSREL 138
Query: 555 IGDLKDLEEDKDISSSHGLNASGQNDNKKRINNYRVHSRSRGPGNHSRSKGRGNCHY 385
K + + + S GL A G+ +K+ N R SRS+ GN+ K + HY
Sbjct: 139 ---KKMVFKSRKYDSGEGLVARGR--TRKKNNGRRGRSRSKSRGNNKCFKCKKEGHY 190
Score = 37.7 bits (86), Expect(3) = 1e-15
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -2
Query: 359 KERQE*STSSTATNCDVDGLVADVGL---TVSLHKWILDSGASFHMTPNKECFDTLE 198
KE + S AT + DV L T S +WILDSG S+HM+PN + F T +
Sbjct: 200 KENKRNYNSGDATFAKENSNTTDVLLVXVTNSDDEWILDSGCSYHMSPNGDWFSTYQ 256
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 47.8 bits (112), Expect(3) = 1e-14
Identities = 29/124 (23%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Frame = -1
Query: 750 SRLTSFDDLLMKMKAMGLKFED*QIAMILLCYHLEKYVALSNSLIYG*DTLTMEDVKMSL 571
+ ++ F +++ + +M ++F+D + ++LLC Y ++++ D LT+ +V +L
Sbjct: 121 NHISVFKEIVADLVSMEVQFDDEDLGLLLLCSLPSSYENFRDTILLSRDELTLAEVYEAL 180
Query: 570 MSEVMIGDLKDLEEDKDISSSHGLNASGQNDNKK-RINNYRVHSRSRGPGNHSRSKGRGN 394
+ + + ++ D S L G+++ + +N R S+SRG S+S+G+
Sbjct: 181 QNREKMKGM--VQSDASSSKGEALQVKGRSEQRTYNDSNDRDKSKSRG---RSKSRGKKF 235
Query: 393 CHYC 382
C YC
Sbjct: 236 CKYC 239
Score = 44.7 bits (104), Expect(3) = 1e-14
Identities = 22/59 (37%), Positives = 38/59 (64%)
Frame = -3
Query: 193 KEGNTIMMTNNLACKYMGIGTVRVKMFDGRTRMITNVMYVPTMSKSLISLGQLANVG*K 17
+ G+ + M N+ + +GIG+V++K DG TR + +V ++P M+++LISL L G K
Sbjct: 316 QNGDVVRMGNDNPREIVGIGSVQIKTHDGITRTLKDVRHIPGMARNLISLSTLDAEGYK 374
Score = 32.7 bits (73), Expect(3) = 1e-14
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2
Query: 341 STSSTATNCDV-DGLVADVGLTVSLHKWILDSGASFHMTPNKECFDT 204
S ++A N D D LV G S +WILD+ SFH+ N++ F +
Sbjct: 265 SVVTSAKNSDSGDCLVVFAGCVASHDEWILDTACSFHIYINRDWFSS 311
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 45.1 bits (105), Expect(3) = 8e-14
Identities = 27/124 (21%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Frame = -1
Query: 750 SRLTSFDDLLMKMKAMGLKFED*QIAMILLCYHLEKYVALSNSLIYG*DTLTMEDVKMSL 571
+ ++ F ++++ + ++ ++F+D + ++LLC Y ++++ D LT+ +V +L
Sbjct: 121 NHISVFKEIVVDLVSIEVQFDDEDLGLLLLCSLPSSYANFRDTILLSRDELTLAEVYEAL 180
Query: 570 MSEVMIGDLKDLEEDKDISSSHGLNASGQNDNKK-RINNYRVHSRSRGPGNHSRSKGRGN 394
+ + + ++ D S L G+++ + ++ R S+SRG S+S+G+
Sbjct: 181 QNREKMKGM--VQSDASSSKGEALQVRGRSEQRTYNDSSDRDKSQSRG---RSKSRGKKF 235
Query: 393 CHYC 382
C YC
Sbjct: 236 CKYC 239
Score = 44.3 bits (103), Expect(3) = 8e-14
Identities = 22/64 (34%), Positives = 40/64 (62%)
Frame = -3
Query: 193 KEGNTIMMTNNLACKYMGIGTVRVKMFDGRTRMITNVMYVPTMSKSLISLGQLANVG*KI 14
+ G+ + M ++ + +GIG+V++K DG TR + +V ++P M+++LISL L G K
Sbjct: 316 QNGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYKY 375
Query: 13 NIVG 2
+ G
Sbjct: 376 SSSG 379
Score = 33.1 bits (74), Expect(3) = 8e-14
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2
Query: 341 STSSTATNCDV-DGLVADVGLTVSLHKWILDSGASFHMTPNKECFDT 204
S ++A N D D LV G S +WILD+ SFH+ N++ F +
Sbjct: 265 SVVTSAENSDSGDCLVVFAGCVASHDEWILDTACSFHICINRDWFSS 311
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 45.1 bits (105), Expect(3) = 8e-13
Identities = 29/124 (23%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Frame = -1
Query: 750 SRLTSFDDLLMKMKAMGLKFED*QIAMILLCYHLEKYVALSNSLIYG*DTLTMEDVKMSL 571
+ ++ F +++ + +M ++F+D + ++LLC Y ++++ D LT+ +V +L
Sbjct: 121 NHISVFKEIVADLVSMEVQFDDEDLGLLLLCSLPSSYANFRHTILLSRDELTLAEVYEAL 180
Query: 570 MS-EVMIGDLKDLEEDKDISSSHGLNASGQNDNKKRINNYRVHSRSRGPGNHSRSKGRGN 394
+ E M G ++ S L G+++ ++ N+ H +S+ G S+S+G+
Sbjct: 181 QNREKMKGMVQSYASS---SKGEALQVRGRSE-QRTYNDSNDHDKSQSRG-RSKSRGKKF 235
Query: 393 CHYC 382
C YC
Sbjct: 236 CKYC 239
Score = 40.8 bits (94), Expect(3) = 8e-13
Identities = 20/56 (35%), Positives = 36/56 (64%)
Frame = -3
Query: 184 NTIMMTNNLACKYMGIGTVRVKMFDGRTRMITNVMYVPTMSKSLISLGQLANVG*K 17
+ + M ++ + +GIG+V++K DG TR + +V ++P M+++LISL L G K
Sbjct: 319 DVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMARNLISLSTLDAEGYK 374
Score = 33.1 bits (74), Expect(3) = 8e-13
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2
Query: 341 STSSTATNCDV-DGLVADVGLTVSLHKWILDSGASFHMTPNKECFDT 204
S ++A N D D LV G S +WILD+ SFH+ N++ F +
Sbjct: 265 SVVTSAENSDSGDCLVVFAGYVASHDEWILDTACSFHICINRDWFSS 311