BLASTX nr result

ID: Atractylodes21_contig00023283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023283
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22243.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi...   164   9e-39
ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34

>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  164 bits (414), Expect = 9e-39
 Identities = 75/93 (80%), Positives = 85/93 (91%)
 Frame = -1

Query: 281 VQEGRGYFSLMRDEYKIEPNIRHYGCMVDLLGRAGLLNEAFEFVDKMKMKPNAIIWRTLL 102
           V+EGR YF LMRDEY IEPNIRHYGCMVDLLGRAGLLNEAF+F+D MK++PNAI+WRTLL
Sbjct: 359 VEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLL 418

Query: 101 GSCRVHNNVELGRRANEELLKLRWGESGDYVLL 3
           G+CR+H NVELGRRAN +LLK+R  ESGDYVLL
Sbjct: 419 GACRIHGNVELGRRANMQLLKMRHDESGDYVLL 451


>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Vitis vinifera]
          Length = 550

 Score =  164 bits (414), Expect = 9e-39
 Identities = 75/93 (80%), Positives = 85/93 (91%)
 Frame = -1

Query: 281 VQEGRGYFSLMRDEYKIEPNIRHYGCMVDLLGRAGLLNEAFEFVDKMKMKPNAIIWRTLL 102
           V+EGR YF LMRDEY IEPNIRHYGCMVDLLGRAGLLNEAF+F+D MK++PNAI+WRTLL
Sbjct: 394 VEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLL 453

Query: 101 GSCRVHNNVELGRRANEELLKLRWGESGDYVLL 3
           G+CR+H NVELGRRAN +LLK+R  ESGDYVLL
Sbjct: 454 GACRIHGNVELGRRANMQLLKMRHDESGDYVLL 486


>ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like, partial [Cucumis sativus]
          Length = 315

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/93 (75%), Positives = 86/93 (92%)
 Frame = -1

Query: 281 VQEGRGYFSLMRDEYKIEPNIRHYGCMVDLLGRAGLLNEAFEFVDKMKMKPNAIIWRTLL 102
           V+EGR YF+LM++ +KIEPNI+HYGCMVD+LGRAGLL EAF+F+D M+++PNAIIWRTLL
Sbjct: 167 VREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLL 226

Query: 101 GSCRVHNNVELGRRANEELLKLRWGESGDYVLL 3
           G+CRVH +VELGRRANE+LLK+R  ESGDYVLL
Sbjct: 227 GACRVHGDVELGRRANEQLLKMRKDESGDYVLL 259


>ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
          Length = 542

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/93 (75%), Positives = 86/93 (92%)
 Frame = -1

Query: 281 VQEGRGYFSLMRDEYKIEPNIRHYGCMVDLLGRAGLLNEAFEFVDKMKMKPNAIIWRTLL 102
           V+EGR YF+LM++ +KIEPNI+HYGCMVD+LGRAGLL EAF+F+D M+++PNAIIWRTLL
Sbjct: 394 VREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLL 453

Query: 101 GSCRVHNNVELGRRANEELLKLRWGESGDYVLL 3
           G+CRVH +VELGRRANE+LLK+R  ESGDYVLL
Sbjct: 454 GACRVHGDVELGRRANEQLLKMRKDESGDYVLL 486


>ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|222867072|gb|EEF04203.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  149 bits (375), Expect = 3e-34
 Identities = 71/93 (76%), Positives = 81/93 (87%)
 Frame = -1

Query: 281 VQEGRGYFSLMRDEYKIEPNIRHYGCMVDLLGRAGLLNEAFEFVDKMKMKPNAIIWRTLL 102
           V+EGR YF LMR+ Y IEPN+ H+GCMVDLLGRAGLL+EAFE + KM+++PNAIIWRTLL
Sbjct: 395 VEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLL 454

Query: 101 GSCRVHNNVELGRRANEELLKLRWGESGDYVLL 3
           G+CRVH NVELGR ANE LLKLR  ESGDYVLL
Sbjct: 455 GACRVHGNVELGRLANERLLKLRRDESGDYVLL 487


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