BLASTX nr result

ID: Atractylodes21_contig00023280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023280
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234678.1| 40S ribosomal protein S17 [Solanum lycopersi...   109   1e-37
gb|ABA46777.1| 40S ribosomal protein S17-like protein [Solanum t...   108   3e-37
gb|AAR83866.1| 40S ribosomal protein S17 [Capsicum annuum]            108   3e-37
ref|XP_002871207.1| 40S ribosomal protein S17 [Arabidopsis lyrat...   106   5e-36
ref|XP_002526912.1| 40S ribosomal protein S17, putative [Ricinus...   103   6e-36

>ref|NP_001234678.1| 40S ribosomal protein S17 [Solanum lycopersicum]
           gi|20141760|sp|P49215.3|RS17_SOLLC RecName: Full=40S
           ribosomal protein S17
           gi|5758304|gb|AAD50774.1|AF161704_1 40S ribosomal
           protein S17 [Solanum lycopersicum]
          Length = 144

 Score =  109 bits (273), Expect(2) = 1e-37
 Identities = 54/58 (93%), Positives = 57/58 (98%)
 Frame = +1

Query: 220 QKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETIEMLAALGMGDLPGVVK 393
           QKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKET++ML+ALGM DLPGVVK
Sbjct: 62  QKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMSDLPGVVK 119



 Score = 72.0 bits (175), Expect(2) = 1e-37
 Identities = 35/37 (94%), Positives = 35/37 (94%)
 Frame = +3

Query: 12  MGRVRTKTVKKSSRLVIERYYGKMTLDFHTNKKILEE 122
           MGRVRTKTVKKSSR VIERYY KMTLDFHTNKKILEE
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEE 37


>gb|ABA46777.1| 40S ribosomal protein S17-like protein [Solanum tuberosum]
          Length = 144

 Score =  108 bits (270), Expect(2) = 3e-37
 Identities = 53/58 (91%), Positives = 57/58 (98%)
 Frame = +1

Query: 220 QKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETIEMLAALGMGDLPGVVK 393
           QKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKET++ML++LGM DLPGVVK
Sbjct: 62  QKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSSLGMSDLPGVVK 119



 Score = 72.0 bits (175), Expect(2) = 3e-37
 Identities = 35/37 (94%), Positives = 35/37 (94%)
 Frame = +3

Query: 12  MGRVRTKTVKKSSRLVIERYYGKMTLDFHTNKKILEE 122
           MGRVRTKTVKKSSR VIERYY KMTLDFHTNKKILEE
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEE 37


>gb|AAR83866.1| 40S ribosomal protein S17 [Capsicum annuum]
          Length = 145

 Score =  108 bits (269), Expect(2) = 3e-37
 Identities = 53/58 (91%), Positives = 57/58 (98%)
 Frame = +1

Query: 220 QKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETIEMLAALGMGDLPGVVK 393
           QKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKET++ML+ALGM +LPGVVK
Sbjct: 62  QKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMAELPGVVK 119



 Score = 72.0 bits (175), Expect(2) = 3e-37
 Identities = 35/37 (94%), Positives = 35/37 (94%)
 Frame = +3

Query: 12  MGRVRTKTVKKSSRLVIERYYGKMTLDFHTNKKILEE 122
           MGRVRTKTVKKSSR VIERYY KMTLDFHTNKKILEE
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEE 37


>ref|XP_002871207.1| 40S ribosomal protein S17 [Arabidopsis lyrata subsp. lyrata]
           gi|297317044|gb|EFH47466.1| 40S ribosomal protein S17
           [Arabidopsis lyrata subsp. lyrata]
          Length = 139

 Score =  106 bits (265), Expect(2) = 5e-36
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +1

Query: 220 QKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETIEMLAALGMGDLPGVVK 393
           QKGPVRGISLKLQEEERERRMDFVPDESAIKTD IEVDKET+EMLA+LGM +LPGVVK
Sbjct: 62  QKGPVRGISLKLQEEERERRMDFVPDESAIKTDHIEVDKETLEMLASLGMSELPGVVK 119



 Score = 69.7 bits (169), Expect(2) = 5e-36
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = +3

Query: 12  MGRVRTKTVKKSSRLVIERYYGKMTLDFHTNKKILEE 122
           MGRVRTKTVKKSSR VIE+YY +MTLDFHTNKKILEE
Sbjct: 1   MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEE 37


>ref|XP_002526912.1| 40S ribosomal protein S17, putative [Ricinus communis]
           gi|223533731|gb|EEF35465.1| 40S ribosomal protein S17,
           putative [Ricinus communis]
          Length = 144

 Score =  103 bits (258), Expect(2) = 6e-36
 Identities = 51/58 (87%), Positives = 56/58 (96%)
 Frame = +1

Query: 220 QKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETIEMLAALGMGDLPGVVK 393
           QKGPVRGISLKLQEEERERRMDFVP+ SAIKTD IEVDKETI+MLAALGMGD+PG+V+
Sbjct: 62  QKGPVRGISLKLQEEERERRMDFVPEVSAIKTDQIEVDKETIDMLAALGMGDMPGLVQ 119



 Score = 72.0 bits (175), Expect(2) = 6e-36
 Identities = 35/37 (94%), Positives = 35/37 (94%)
 Frame = +3

Query: 12  MGRVRTKTVKKSSRLVIERYYGKMTLDFHTNKKILEE 122
           MGRVRTKTVKKSSR VIERYY KMTLDFHTNKKILEE
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEE 37


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