BLASTX nr result

ID: Atractylodes21_contig00023274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023274
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA26983.1| TO30-3 [Taraxacum officinale]                           83   3e-14
ref|XP_642264.1| WD40 repeat-containing protein [Dictyostelium d...    75   5e-12
ref|XP_003632792.1| PREDICTED: coatomer subunit beta'-2-like [Vi...    74   9e-12
ref|XP_003290937.1| hypothetical protein DICPUDRAFT_49561 [Dicty...    74   9e-12
emb|CBI36160.3| unnamed protein product [Vitis vinifera]               74   9e-12

>gb|ABA26983.1| TO30-3 [Taraxacum officinale]
          Length = 90

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = +3

Query: 84  TAKFIAQKKWIVVGTYDGFIRAYNYDTMESVVELQAHAYSIRSMVVHPSLPYVLS 248
           TAKFIA K+WIVVG+ DGF+R YNY   ESVVEL+AH   IRS+ VHPSLPY+LS
Sbjct: 2   TAKFIAHKEWIVVGSDDGFLRVYNYKNEESVVELKAHTDFIRSVAVHPSLPYILS 56


>ref|XP_642264.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
           gi|74997205|sp|Q54YD8.1|COPB2_DICDI RecName:
           Full=Coatomer subunit beta'; AltName: Full=Beta'-coat
           protein; Short=Beta'-COP gi|60470335|gb|EAL68315.1| WD40
           repeat-containing protein [Dictyostelium discoideum AX4]
          Length = 1005

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 33/57 (57%), Positives = 45/57 (78%)
 Frame = +3

Query: 78  VCTAKFIAQKKWIVVGTYDGFIRAYNYDTMESVVELQAHAYSIRSMVVHPSLPYVLS 248
           V TA+FIA+K+WIV G+ D +IR YNY+TME +   +AHA  IR ++VHP+LPY+LS
Sbjct: 61  VRTARFIAKKQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILS 117


>ref|XP_003632792.1| PREDICTED: coatomer subunit beta'-2-like [Vitis vinifera]
          Length = 230

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = +3

Query: 78  VCTAKFIAQKKWIVVGTYDGFIRAYNYDTMESVVELQAHAYSIRSMVVHPSLPYVLS 248
           V +AKFIA K+W++ G  D FIR +NYDTM  V E +AH   IRS+ VHP+LPYVLS
Sbjct: 76  VRSAKFIATKQWVITGADDKFIRVFNYDTMVKVAEFEAHTDYIRSVAVHPTLPYVLS 132


>ref|XP_003290937.1| hypothetical protein DICPUDRAFT_49561 [Dictyostelium purpureum]
           gi|325078898|gb|EGC32525.1| hypothetical protein
           DICPUDRAFT_49561 [Dictyostelium purpureum]
          Length = 986

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 33/57 (57%), Positives = 44/57 (77%)
 Frame = +3

Query: 78  VCTAKFIAQKKWIVVGTYDGFIRAYNYDTMESVVELQAHAYSIRSMVVHPSLPYVLS 248
           V TAKFI +K+WIV G+ D +IR YNY+TME +   +AHA  IR ++VHP+LPY+LS
Sbjct: 61  VRTAKFIPKKQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILS 117


>emb|CBI36160.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = +3

Query: 78  VCTAKFIAQKKWIVVGTYDGFIRAYNYDTMESVVELQAHAYSIRSMVVHPSLPYVLS 248
           V +AKFIA K+W++ G  D FIR +NYDTM  V E +AH   IRS+ VHP+LPYVLS
Sbjct: 89  VRSAKFIATKQWVITGADDKFIRVFNYDTMVKVAEFEAHTDYIRSVAVHPTLPYVLS 145


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