BLASTX nr result

ID: Atractylodes21_contig00023241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023241
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   161   6e-38
ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatul...   154   7e-36
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   153   2e-35
ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...   152   3e-35
ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34

>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  161 bits (407), Expect = 6e-38
 Identities = 73/116 (62%), Positives = 87/116 (75%), Gaps = 3/116 (2%)
 Frame = +2

Query: 8   IGSYGYQQPLFYSYRQGLVYPSYPYGTYGPEYVYPQGIYNLHSGQQYLQIY---GAVNTP 178
           +G++GYQQP+ YSY+QG +YPSY Y  YGPEYVYPQG+YN + GQQYLQIY   G VNT 
Sbjct: 139 VGNFGYQQPVSYSYQQGFMYPSYGYAAYGPEYVYPQGVYNPYPGQQYLQIYGVPGTVNTA 198

Query: 179 MYPYNQMGQIGTGGHGYPAFQSYPLPGHQVMQFGGASVHATATSSIQTIQAAYPIG 346
           +YPY Q+GQ     HGY   Q Y +PGHQ MQFGG+SV+A +TS I TIQA YP G
Sbjct: 199 IYPYGQLGQTLPSSHGYTTVQGYAMPGHQFMQFGGSSVNAISTSPIPTIQAPYPTG 254


>ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatula]
           gi|355492925|gb|AES74128.1| RNA-binding protein 24-B
           [Medicago truncatula]
          Length = 371

 Score =  154 bits (389), Expect = 7e-36
 Identities = 70/115 (60%), Positives = 87/115 (75%), Gaps = 4/115 (3%)
 Frame = +2

Query: 8   IGSYGYQQPLFYSYRQGLVYPSYPYGTYGPEYVYPQGIYNLHSG-QQYLQIY---GAVNT 175
           +G YGYQQPL Y Y+QG+VYP Y Y TYGPEYVYPQG+YN ++G QQYLQIY   GA+NT
Sbjct: 137 VGGYGYQQPLSYGYQQGMVYPPYGYTTYGPEYVYPQGMYNPYAGQQQYLQIYGVPGAMNT 196

Query: 176 PMYPYNQMGQIGTGGHGYPAFQSYPLPGHQVMQFGGASVHATATSSIQTIQAAYP 340
            +YPY Q+GQ   GGHGY A Q Y +PGHQ++ +GG++V+A  TS +  IQ  YP
Sbjct: 197 TIYPYGQLGQAIPGGHGYTAMQGYTVPGHQIVPYGGSNVNAITTSPVPAIQVPYP 251


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  153 bits (386), Expect = 2e-35
 Identities = 70/117 (59%), Positives = 89/117 (76%), Gaps = 4/117 (3%)
 Frame = +2

Query: 8   IGSYGYQQPLFYSYRQGLVYPSYPYGTYGPEYVYPQGIYNLHSGQQYLQIY---GAVN-T 175
           +G +GYQQP+ YSY+QGLVYP Y Y +YGPEY+YPQ +YN + GQQYLQIY   GAVN T
Sbjct: 139 VGGFGYQQPVSYSYQQGLVYPPYGYTSYGPEYIYPQSLYNPYMGQQYLQIYGVPGAVNTT 198

Query: 176 PMYPYNQMGQIGTGGHGYPAFQSYPLPGHQVMQFGGASVHATATSSIQTIQAAYPIG 346
            +YPY Q+GQ  T GHGY A Q Y +PGHQ++ +GG++V+A  TS +  IQA+YP G
Sbjct: 199 TIYPYGQVGQAITSGHGYSAMQGYTVPGHQIVPYGGSNVNAITTSPMPAIQASYPSG 255


>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
           max]
          Length = 293

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/117 (59%), Positives = 88/117 (75%), Gaps = 4/117 (3%)
 Frame = +2

Query: 8   IGSYGYQQ-PLFYSYRQGLVYPSYPYGTYGPEYVYPQGIYNLHSGQQYLQIY---GAVNT 175
           +G +GYQQ P+ YSY+QGLVYP Y Y TYGPEY+YPQ +YN + GQQYLQIY   GAVNT
Sbjct: 146 VGGFGYQQQPVSYSYQQGLVYPPYGYTTYGPEYIYPQSLYNPYMGQQYLQIYGVPGAVNT 205

Query: 176 PMYPYNQMGQIGTGGHGYPAFQSYPLPGHQVMQFGGASVHATATSSIQTIQAAYPIG 346
            +YPY Q+GQ    GHGY A Q Y +PGHQ++ +GG++V+A  TS +  IQA+YP G
Sbjct: 206 TVYPYGQVGQAIPSGHGYSAIQGYTVPGHQIVPYGGSNVNAITTSPMPAIQASYPSG 262


>ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|222842347|gb|EEE79894.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/116 (61%), Positives = 82/116 (70%), Gaps = 4/116 (3%)
 Frame = +2

Query: 11  GSYGYQQPLFYSYRQGLVYPSYPYGTYGPEYVYPQGIYNLHS-GQQYLQIYGA---VNTP 178
           GS+GYQQP+ Y Y+QGL+Y  Y Y  YGPEYVY QG+YN ++ GQQYLQIYG    VNT 
Sbjct: 141 GSFGYQQPVSYGYQQGLMYHPYGYAAYGPEYVYQQGVYNPYAAGQQYLQIYGVPGTVNTG 200

Query: 179 MYPYNQMGQIGTGGHGYPAFQSYPLPGHQVMQFGGASVHATATSSIQTIQAAYPIG 346
           MYPY Q GQ   GGHGY   Q Y +PGH +MQFGG  V+A  TS + TIQA YP G
Sbjct: 201 MYPYGQFGQNVPGGHGYTTMQGYAVPGHHIMQFGGPGVNAMTTSPLPTIQAPYPTG 256


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