BLASTX nr result

ID: Atractylodes21_contig00023206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023206
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300896.1| predicted protein [Populus trichocarpa] gi|2...    57   4e-06
dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]                           56   6e-06
gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]             55   8e-06
dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]     55   8e-06
dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]                           55   8e-06

>ref|XP_002300896.1| predicted protein [Populus trichocarpa] gi|222842622|gb|EEE80169.1|
           predicted protein [Populus trichocarpa]
          Length = 648

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 26/48 (54%), Positives = 37/48 (77%)
 Frame = +2

Query: 452 KRKLSKP*HNLEQKMRQANLYMKNLDETITKDELEELFSEFGTITSCK 595
           K K  +  ++  +KM+ ANLY+KNL +TI ++ L+ELFSEFG+ITSCK
Sbjct: 298 KAKFEQERNSRYEKMKAANLYLKNLGDTIDEERLKELFSEFGSITSCK 345


>dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
          Length = 642

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +2

Query: 491 KMRQANLYMKNLDETITKDELEELFSEFGTITSCK 595
           K +  NLY+KNLD++IT D+L+ELFSEFGTITSCK
Sbjct: 307 KFQGLNLYVKNLDDSITDDKLKELFSEFGTITSCK 341


>gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
          Length = 651

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/48 (52%), Positives = 32/48 (66%)
 Frame = +2

Query: 452 KRKLSKP*HNLEQKMRQANLYMKNLDETITKDELEELFSEFGTITSCK 595
           K K  K       K +  NLY+KNLD+T+  ++L ELF+EFGTITSCK
Sbjct: 297 KEKFEKNLQEAADKYQNTNLYLKNLDDTVDDEKLRELFAEFGTITSCK 344


>dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 744

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/48 (52%), Positives = 32/48 (66%)
 Frame = +2

Query: 452 KRKLSKP*HNLEQKMRQANLYMKNLDETITKDELEELFSEFGTITSCK 595
           K K  K       K +  NLY+KNLD+T+  ++L ELF+EFGTITSCK
Sbjct: 390 KEKFEKNLQEAADKYQNTNLYLKNLDDTVDDEKLRELFAEFGTITSCK 437


>dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
          Length = 642

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +2

Query: 491 KMRQANLYMKNLDETITKDELEELFSEFGTITSCK 595
           K    NLY+KNLD++IT D+L+ELFSEFGTITSCK
Sbjct: 307 KFEGLNLYVKNLDDSITDDKLKELFSEFGTITSCK 341


Top