BLASTX nr result

ID: Atractylodes21_contig00023152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023152
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vin...   179   7e-43
ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucu...   176   4e-42
ref|XP_002513523.1| polyadenylate-binding protein, putative [Ric...   174   2e-41
ref|XP_002314085.1| predicted protein [Populus trichocarpa] gi|2...   172   9e-41
gb|ABK96138.1| unknown [Populus trichocarpa]                          172   9e-41

>ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vinifera]
           gi|296088561|emb|CBI37552.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  179 bits (453), Expect = 7e-43
 Identities = 86/104 (82%), Positives = 96/104 (92%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2   RTNRMSGR-FDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLQNVFGEFGEIKNLHLN 178
           R +R + R FDSLDSDGGPGP+RSIEGWIILVTGVHEEAQEDDLQN FGEFGE+KNLHLN
Sbjct: 71  RNSRFAARDFDSLDSDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEVKNLHLN 130

Query: 179 LDRRTGFVKGYALIEYENLEEAKKAITSMDGGELLTQIVNVDWA 310
           LDRRTGFVKGYALIEYENLEEA+ AI++M+G ELLTQ ++VDWA
Sbjct: 131 LDRRTGFVKGYALIEYENLEEAQAAISAMNGTELLTQTISVDWA 174


>ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucumis sativus]
          Length = 197

 Score =  176 bits (447), Expect = 4e-42
 Identities = 86/104 (82%), Positives = 94/104 (90%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2   RTNRMSGR-FDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLQNVFGEFGEIKNLHLN 178
           R  R++G  FDSL S  GPGP+RSIEGWIILVTGVHEEAQEDDLQN FGEFGEIKNLHLN
Sbjct: 68  RNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLN 127

Query: 179 LDRRTGFVKGYALIEYENLEEAKKAITSMDGGELLTQIVNVDWA 310
           LDRRTGFVKGYALIEYE+ EEA+KAI++MDG ELLTQI+NVDWA
Sbjct: 128 LDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWA 171


>ref|XP_002513523.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223547431|gb|EEF48926.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 199

 Score =  174 bits (440), Expect = 2e-41
 Identities = 82/97 (84%), Positives = 89/97 (91%)
 Frame = +2

Query: 20  GRFDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLQNVFGEFGEIKNLHLNLDRRTGF 199
           G FDSL +DGGPGP+RSIEGWIILVTGVHEEAQEDDLQN FG+FGEIKNLHLNLDRRTGF
Sbjct: 77  GDFDSLGTDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGDFGEIKNLHLNLDRRTGF 136

Query: 200 VKGYALIEYENLEEAKKAITSMDGGELLTQIVNVDWA 310
           VKGYALIEYE  EEA+ AI S++G ELLTQI+NVDWA
Sbjct: 137 VKGYALIEYEKFEEAQNAIASLNGTELLTQIINVDWA 173


>ref|XP_002314085.1| predicted protein [Populus trichocarpa] gi|222850493|gb|EEE88040.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  172 bits (435), Expect = 9e-41
 Identities = 82/104 (78%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2   RTNRMSGR-FDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLQNVFGEFGEIKNLHLN 178
           R +R SGR FDSL SDGGPGP+RS+EGWIILV+GVHEEAQ+D LQ  FGEFGEIKNLHLN
Sbjct: 72  RQSRFSGRGFDSLGSDGGPGPQRSVEGWIILVSGVHEEAQDDHLQEAFGEFGEIKNLHLN 131

Query: 179 LDRRTGFVKGYALIEYENLEEAKKAITSMDGGELLTQIVNVDWA 310
           LDRRTGFVKGYALIEYEN E+A+ AI SM+GG LL Q++NVDWA
Sbjct: 132 LDRRTGFVKGYALIEYENFEQAENAIASMNGGTLLEQVINVDWA 175


>gb|ABK96138.1| unknown [Populus trichocarpa]
          Length = 205

 Score =  172 bits (435), Expect = 9e-41
 Identities = 82/104 (78%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2   RTNRMSGR-FDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLQNVFGEFGEIKNLHLN 178
           R +R SGR FDSL SDGGPGP+RS+EGWIILV+GVHEEAQ+D LQ  FGEFGEIKNLHLN
Sbjct: 72  RQSRFSGRGFDSLGSDGGPGPQRSVEGWIILVSGVHEEAQDDHLQEAFGEFGEIKNLHLN 131

Query: 179 LDRRTGFVKGYALIEYENLEEAKKAITSMDGGELLTQIVNVDWA 310
           LDRRTGFVKGYALIEYEN E+A+ AI SM+GG LL Q++NVDWA
Sbjct: 132 LDRRTGFVKGYALIEYENFEQAENAIASMNGGTLLEQVINVDWA 175


Top