BLASTX nr result

ID: Atractylodes21_contig00023088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00023088
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Popu...    61   1e-07
ref|XP_002521085.1| DNA binding protein, putative [Ricinus commu...    58   7e-07

>ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Populus trichocarpa]
           gi|222844768|gb|EEE82315.1| hypothetical protein
           POPTRDRAFT_756271 [Populus trichocarpa]
          Length = 2006

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
 Frame = -1

Query: 211 FDGDNKFQEIGRKPVHP-HADNTTTSKHYSQLDVGHIT--TGDSAVLELPKKSYKRRIRS 41
           FDG+N+  E+ RK  HP   +N T S+  SQ+D  H    + DSA+     + Y RR RS
Sbjct: 136 FDGENELLEVERKRKHPSRRNNVTQSEQSSQMDGIHNAKESEDSAIF----RPYARRNRS 191

Query: 40  RPNRDGARSSSTD 2
           RPNRDGARSSSTD
Sbjct: 192 RPNRDGARSSSTD 204


>ref|XP_002521085.1| DNA binding protein, putative [Ricinus communis]
           gi|223539654|gb|EEF41236.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 2009

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
 Frame = -1

Query: 211 FDGDNKFQEIGRKPVHPHADNTTTSKHYSQLDVGHIT--TGDSAVLELPKKSYKRRIRSR 38
           FD +N+  +  R P HP   N  +S+  SQ+D       + DSA++    + Y RR RSR
Sbjct: 136 FDAENEILQSERNPKHPSRSNIASSEQSSQMDGNQNAKESEDSAIV----RPYARRNRSR 191

Query: 37  PNRDGARSSSTD 2
           PNRDGARSSSTD
Sbjct: 192 PNRDGARSSSTD 203


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