BLASTX nr result

ID: Atractylodes21_contig00022969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022969
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872489.1| predicted protein [Arabidopsis lyrata subsp....   115   3e-24
ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|NP_567351.1| elongator protein 6 [Arabidopsis thaliana] gi|7...   112   2e-23
emb|CAB39761.1| hypothetical protein [Arabidopsis thaliana] gi|7...   112   2e-23
ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like ...   110   2e-22

>ref|XP_002872489.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318326|gb|EFH48748.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/82 (67%), Positives = 69/82 (84%)
 Frame = -3

Query: 249 PRRGRLVLVEDCVETSGAFVLHQLIKRFLSPNLSSSDSIVIFVAFAETFSHYDRILRKMG 70
           P  G+++L+EDCVETSG+FVLHQL+KR LSPN  SSD++ IF+AFA  FSHYDRILRK+G
Sbjct: 23  PLNGKVILIEDCVETSGSFVLHQLMKRVLSPN--SSDAL-IFLAFARPFSHYDRILRKLG 79

Query: 69  CNLAVQRENKRLIFFDMLRLEC 4
           CNLA  + N RL+FFDML ++C
Sbjct: 80  CNLATHKTNNRLVFFDMLMIKC 101


>ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|222851871|gb|EEE89418.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/83 (66%), Positives = 65/83 (78%)
 Frame = -3

Query: 249 PRRGRLVLVEDCVETSGAFVLHQLIKRFLSPNLSSSDSIVIFVAFAETFSHYDRILRKMG 70
           P RG++VL+EDCVETSG FVLHQL+KR LS    S ++ VIF+AF+   SHYDRILRK+G
Sbjct: 23  PLRGKVVLIEDCVETSGCFVLHQLLKRTLSSQ--SPNNTVIFLAFSHPLSHYDRILRKLG 80

Query: 69  CNLAVQRENKRLIFFDMLRLECP 1
           CNL  QREN R  FFDML+L CP
Sbjct: 81  CNLVAQRENGRFFFFDMLKLLCP 103


>ref|NP_567351.1| elongator protein 6 [Arabidopsis thaliana]
           gi|75154680|sp|Q8L9Y2.1|ELP6_ARATH RecName:
           Full=Elongator complex protein 6; Short=AtELP6; AltName:
           Full=Elongator component 6; AltName: Full=UPF0405
           protein ELP6 gi|21593728|gb|AAM65695.1| unknown
           [Arabidopsis thaliana] gi|87116610|gb|ABD19669.1|
           At4g10090 [Arabidopsis thaliana]
           gi|110735719|dbj|BAE99839.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657437|gb|AEE82837.1|
           elongator protein 6 [Arabidopsis thaliana]
          Length = 262

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/82 (65%), Positives = 68/82 (82%)
 Frame = -3

Query: 249 PRRGRLVLVEDCVETSGAFVLHQLIKRFLSPNLSSSDSIVIFVAFAETFSHYDRILRKMG 70
           P  G+++L+EDCVETSG+FVLHQL+KR LS N  SSD++ IF+AFA  FSHYDRILRK+G
Sbjct: 23  PLNGKVILIEDCVETSGSFVLHQLMKRVLSSN--SSDAL-IFLAFARPFSHYDRILRKLG 79

Query: 69  CNLAVQRENKRLIFFDMLRLEC 4
           CNLA  + N RL+FFDML ++C
Sbjct: 80  CNLATHKSNNRLVFFDMLMVKC 101


>emb|CAB39761.1| hypothetical protein [Arabidopsis thaliana]
           gi|7267705|emb|CAB78132.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 253

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/82 (65%), Positives = 68/82 (82%)
 Frame = -3

Query: 249 PRRGRLVLVEDCVETSGAFVLHQLIKRFLSPNLSSSDSIVIFVAFAETFSHYDRILRKMG 70
           P  G+++L+EDCVETSG+FVLHQL+KR LS N  SSD++ IF+AFA  FSHYDRILRK+G
Sbjct: 23  PLNGKVILIEDCVETSGSFVLHQLMKRVLSSN--SSDAL-IFLAFARPFSHYDRILRKLG 79

Query: 69  CNLAVQRENKRLIFFDMLRLEC 4
           CNLA  + N RL+FFDML ++C
Sbjct: 80  CNLATHKSNNRLVFFDMLMVKC 101


>ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like [Cucumis sativus]
          Length = 260

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/83 (66%), Positives = 68/83 (81%), Gaps = 1/83 (1%)
 Frame = -3

Query: 249 PRRGRLVLVEDCVETSGAFVLHQLIKR-FLSPNLSSSDSIVIFVAFAETFSHYDRILRKM 73
           P  GRL+LVEDCVETSGAFVLH L+KR F SP+   S ++VIF+AF+++F HYDRILRK+
Sbjct: 23  PLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPH---SSNVVIFLAFSQSFIHYDRILRKL 79

Query: 72  GCNLAVQRENKRLIFFDMLRLEC 4
           GCNLA QR++ R +FFDML L C
Sbjct: 80  GCNLAAQRDSGRFVFFDMLTLGC 102


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