BLASTX nr result

ID: Atractylodes21_contig00022937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022937
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269774.2| PREDICTED: dynamin-related protein 3A-like [...    64   5e-08
emb|CAN69848.1| hypothetical protein VITISV_007522 [Vitis vinifera]    64   5e-08
ref|XP_004163937.1| PREDICTED: LOW QUALITY PROTEIN: dynamin-rela...    63   1e-07
ref|XP_004147508.1| PREDICTED: dynamin-related protein 3A-like [...    63   1e-07
ref|XP_002327916.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-07

>ref|XP_002269774.2| PREDICTED: dynamin-related protein 3A-like [Vitis vinifera]
          Length = 831

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 37/56 (66%), Positives = 40/56 (71%), Gaps = 5/56 (8%)
 Frame = -2

Query: 632 LGHNVIQIVN*IQDFFALLGSYSTIELPQVIVI-----CMSSVLEALVCHDFFPRG 480
           LGH+VI IVN +QD FA LGS STIELPQV V+       SSVLEALV  DF PRG
Sbjct: 20  LGHSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKSSVLEALVGRDFLPRG 75


>emb|CAN69848.1| hypothetical protein VITISV_007522 [Vitis vinifera]
          Length = 166

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 37/56 (66%), Positives = 40/56 (71%), Gaps = 5/56 (8%)
 Frame = -2

Query: 632 LGHNVIQIVN*IQDFFALLGSYSTIELPQVIVI-----CMSSVLEALVCHDFFPRG 480
           LGH+VI IVN +QD FA LGS STIELPQV V+       SSVLEALV  DF PRG
Sbjct: 20  LGHSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKSSVLEALVGRDFLPRG 75


>ref|XP_004163937.1| PREDICTED: LOW QUALITY PROTEIN: dynamin-related protein 3A-like
           [Cucumis sativus]
          Length = 822

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 42/80 (52%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
 Frame = -2

Query: 632 LGHNVIQIVN*IQDFFALLGSYSTIELPQVIVI-----CMSSVLEALVCHDFFPRGFTAE 468
           LG +VI IVN +QD FA LGS STIELPQV V+       SSVLEALV  DF PRG    
Sbjct: 21  LGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKSSVLEALVGRDFLPRGS--- 77

Query: 467 VFLIVL*GFVIRWPVVVELL 408
                  G   R P+V++LL
Sbjct: 78  -------GICTRRPLVLQLL 90


>ref|XP_004147508.1| PREDICTED: dynamin-related protein 3A-like [Cucumis sativus]
          Length = 822

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 42/80 (52%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
 Frame = -2

Query: 632 LGHNVIQIVN*IQDFFALLGSYSTIELPQVIVI-----CMSSVLEALVCHDFFPRGFTAE 468
           LG +VI IVN +QD FA LGS STIELPQV V+       SSVLEALV  DF PRG    
Sbjct: 21  LGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKSSVLEALVGRDFLPRGS--- 77

Query: 467 VFLIVL*GFVIRWPVVVELL 408
                  G   R P+V++LL
Sbjct: 78  -------GICTRRPLVLQLL 90


>ref|XP_002327916.1| predicted protein [Populus trichocarpa] gi|222837325|gb|EEE75704.1|
           predicted protein [Populus trichocarpa]
          Length = 821

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 39/68 (57%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
 Frame = -2

Query: 668 QSHDPFPHQRHILGHNVIQIVN*IQDFFALLGSYSTIELPQVIVI-----CMSSVLEALV 504
           QS  P       LG +VI IVN +QD FA LGS STIELPQV V+       SSVLEALV
Sbjct: 13  QSQPPQSSSAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKSSVLEALV 72

Query: 503 CHDFFPRG 480
             DF PRG
Sbjct: 73  GRDFLPRG 80


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