BLASTX nr result

ID: Atractylodes21_contig00022908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022908
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...    98   6e-19
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ...    98   6e-19
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    94   9e-18
emb|CCH50976.1| T4.15 [Malus x robusta]                                94   2e-17
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    92   4e-17

>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/73 (60%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
 Frame = +1

Query: 4   LESRGLRISRSKTEYLWCNFSDA-PSGESCEVNIGGERVPQCDSFKYLGSVIQKDGEVDN 180
           LES+G R+SR+KTEY+ C FS   P  E  EV++ G+ VPQ D+F+YLGS++QKDG++D 
Sbjct: 336 LESKGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLGSMLQKDGDIDE 395

Query: 181 DVTHRIKAGWLKW 219
           DV HRIKAGW+KW
Sbjct: 396 DVNHRIKAGWMKW 408


>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
           jockey-like [Brachypodium distachyon]
          Length = 307

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/73 (60%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
 Frame = +1

Query: 4   LESRGLRISRSKTEYLWCNFSDA-PSGESCEVNIGGERVPQCDSFKYLGSVIQKDGEVDN 180
           LES+G R+SR+KTEY+ C FS   P  E  EV++ G+ VPQ D+F+YLGS++QKDG++D 
Sbjct: 76  LESKGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLGSMLQKDGDIDE 135

Query: 181 DVTHRIKAGWLKW 219
           DV HRIKAGW+KW
Sbjct: 136 DVNHRIKAGWMKW 148


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/73 (57%), Positives = 54/73 (73%)
 Frame = +1

Query: 1   ALESRGLRISRSKTEYLWCNFSDAPSGESCEVNIGGERVPQCDSFKYLGSVIQKDGEVDN 180
           ALE+ G R+SRSKT+Y+ CNFS   S  + EV +G   +PQ   FKYLGS +Q DGE++ 
Sbjct: 399 ALEAYGFRLSRSKTKYMECNFSGRRSRSTLEVKVGDHIIPQVTRFKYLGSFVQNDGEIEA 458

Query: 181 DVTHRIKAGWLKW 219
           DV+HRI+AGWLKW
Sbjct: 459 DVSHRIQAGWLKW 471


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 40/72 (55%), Positives = 54/72 (75%)
 Frame = +1

Query: 4   LESRGLRISRSKTEYLWCNFSDAPSGESCEVNIGGERVPQCDSFKYLGSVIQKDGEVDND 183
           LES+GLR+SRSKTEY+ C FS         V IG + +P+ D F+YLGS++QK+GE+D D
Sbjct: 754 LESKGLRLSRSKTEYMECKFSANGGQNELGVRIGDQEIPKSDRFRYLGSILQKNGELDGD 813

Query: 184 VTHRIKAGWLKW 219
           + HRI+AGW+KW
Sbjct: 814 LNHRIQAGWMKW 825


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 40/72 (55%), Positives = 54/72 (75%)
 Frame = +1

Query: 4   LESRGLRISRSKTEYLWCNFSDAPSGESCEVNIGGERVPQCDSFKYLGSVIQKDGEVDND 183
           LES+GL +SRSKTEY+ C FS   S     V IG + +P+ D F+YLGS++QK+GE+D D
Sbjct: 422 LESKGLCLSRSKTEYMECKFSANGSQNELGVRIGDQEIPKSDRFRYLGSILQKNGELDED 481

Query: 184 VTHRIKAGWLKW 219
           + HRI+AGW+KW
Sbjct: 482 LNHRIQAGWMKW 493


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