BLASTX nr result

ID: Atractylodes21_contig00022849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022849
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525383.1| Polygalacturonase-1 non-catalytic subunit be...    60   2e-07
ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|2...    55   3e-07
sp|P93218.1|GP3_SOLLC RecName: Full=Polygalacturonase non-cataly...    54   1e-06
sp|P93217.1|GP2_SOLLC RecName: Full=Polygalacturonase non-cataly...    54   1e-06
ref|NP_001234835.1| polygalacturonase-1 non-catalytic subunit be...    53   6e-06

>ref|XP_002525383.1| Polygalacturonase-1 non-catalytic subunit beta precursor, putative
           [Ricinus communis] gi|223535346|gb|EEF37021.1|
           Polygalacturonase-1 non-catalytic subunit beta
           precursor, putative [Ricinus communis]
          Length = 631

 Score = 60.5 bits (145), Expect(2) = 2e-07
 Identities = 28/58 (48%), Positives = 39/58 (67%)
 Frame = +3

Query: 450 LNVCSWRPAPGEVKQCLGSLKDLSEFVTPVVGPGALARTSADKLGPGKNIVLGSVKSI 623
           L  C   P+PGE K+C+GS +DL +F T V+G   +ART+A+  G  KNI +GS+K I
Sbjct: 481 LTECERAPSPGETKRCIGSAEDLIDFATSVLGRNVVARTTANVNGSKKNIKIGSIKGI 538



 Score = 20.4 bits (41), Expect(2) = 2e-07
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 367 FLPPMILSKLPLS 405
           FLP  I SKLP S
Sbjct: 442 FLPRSITSKLPFS 454


>ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|222851597|gb|EEE89144.1|
           predicted protein [Populus trichocarpa]
          Length = 598

 Score = 55.1 bits (131), Expect(2) = 3e-07
 Identities = 25/58 (43%), Positives = 36/58 (62%)
 Frame = +3

Query: 450 LNVCSWRPAPGEVKQCLGSLKDLSEFVTPVVGPGALARTSADKLGPGKNIVLGSVKSI 623
           L  C   P+PGE K+C GS +D+ +F T V+G     RT+ +  G  KNI++GS+K I
Sbjct: 448 LEECERSPSPGETKRCAGSAEDMIDFATSVLGRNVAVRTTDNVNGSKKNIMIGSIKGI 505



 Score = 25.0 bits (53), Expect(2) = 3e-07
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 367 FLPPMILSKLPLSEELIDE 423
           FLP  I+SKLP S   ID+
Sbjct: 409 FLPRSIISKLPFSTSKIDQ 427


>sp|P93218.1|GP3_SOLLC RecName: Full=Polygalacturonase non-catalytic subunit AroGP3;
           Flags: Precursor gi|1762636|gb|AAB39557.1| AROGP3
           [Solanum lycopersicum]
          Length = 632

 Score = 54.3 bits (129), Expect(2) = 1e-06
 Identities = 24/58 (41%), Positives = 37/58 (63%)
 Frame = +3

Query: 450 LNVCSWRPAPGEVKQCLGSLKDLSEFVTPVVGPGALARTSADKLGPGKNIVLGSVKSI 623
           L+ C   P+PGE KQC+ S +D+ +F T V+G   + RT+ +  G   NI++GS+K I
Sbjct: 482 LSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGI 539



 Score = 23.9 bits (50), Expect(2) = 1e-06
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 367 FLPPMILSKLPLSEELIDE 423
           FLP  I +KLP S   IDE
Sbjct: 443 FLPRAIAAKLPFSTSKIDE 461


>sp|P93217.1|GP2_SOLLC RecName: Full=Polygalacturonase non-catalytic subunit AroGP2;
           Flags: Precursor gi|1762634|gb|AAB39556.1| AROGP2
           [Solanum lycopersicum]
          Length = 629

 Score = 54.3 bits (129), Expect(2) = 1e-06
 Identities = 24/58 (41%), Positives = 37/58 (63%)
 Frame = +3

Query: 450 LNVCSWRPAPGEVKQCLGSLKDLSEFVTPVVGPGALARTSADKLGPGKNIVLGSVKSI 623
           L+ C   P+PGE KQC+ S +D+ +F T V+G   + RT+ +  G   NI++GS+K I
Sbjct: 479 LSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGI 536



 Score = 23.9 bits (50), Expect(2) = 1e-06
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 367 FLPPMILSKLPLSEELIDE 423
           FLP  I +KLP S   IDE
Sbjct: 440 FLPRAIAAKLPFSTSKIDE 458


>ref|NP_001234835.1| polygalacturonase-1 non-catalytic subunit beta precursor [Solanum
           lycopersicum] gi|75220933|sp|Q40161.1|GP1_SOLLC RecName:
           Full=Polygalacturonase-1 non-catalytic subunit beta;
           AltName: Full=AroGP1; AltName: Full=Polygalacturonase
           converter; Short=PG converter; Flags: Precursor
           gi|170480|gb|AAA34181.1| polygalacturonase isoenzyme 1
           beta subunit [Solanum lycopersicum]
           gi|1762586|gb|AAB39547.1| polygalacturonase isoenzyme 1
           beta subunit [Solanum lycopersicum]
          Length = 630

 Score = 53.1 bits (126), Expect(2) = 6e-06
 Identities = 24/58 (41%), Positives = 36/58 (62%)
 Frame = +3

Query: 450 LNVCSWRPAPGEVKQCLGSLKDLSEFVTPVVGPGALARTSADKLGPGKNIVLGSVKSI 623
           L+ C   P+ GE K+C+ S +D+ +F T V+G   + RT+ D  G   NI++GSVK I
Sbjct: 480 LSECERAPSAGETKRCVNSAEDMIDFATSVLGRNVVVRTTEDTKGSNGNIMIGSVKGI 537



 Score = 22.7 bits (47), Expect(2) = 6e-06
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 367 FLPPMILSKLPLSEELIDE 423
           FLP +I SKLP S   I E
Sbjct: 441 FLPRVIASKLPFSTSKIAE 459


Top