BLASTX nr result

ID: Atractylodes21_contig00022846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022846
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521298.1| PREDICTED: dolichyl-diphosphooligosaccharide...    55   5e-06
ref|NP_001190784.1| ribophorin II (RPN2) family protein [Arabido...    55   6e-06
ref|NP_193847.2| ribophorin II (RPN2) family protein [Arabidopsi...    55   6e-06

>ref|XP_003521298.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit 2-like [Glycine max]
          Length = 687

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/68 (47%), Positives = 44/68 (64%)
 Frame = -2

Query: 298 MARTLGFVVVLLAVASICDAVAVFHPIAESHRSAALELFSPTAVSFSSLEEAIDVTPKEF 119
           MAR LG ++ LL   SIC AV +  P++++HRSAALELF     SFSSLEEA +   + F
Sbjct: 1   MARNLGGLLALLFAVSICGAVTIPGPVSDAHRSAALELFDG---SFSSLEEAYEAL-RVF 56

Query: 118 SVRTVAQE 95
            + T+  +
Sbjct: 57  EILTIGNK 64


>ref|NP_001190784.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana]
           gi|332659009|gb|AEE84409.1| ribophorin II (RPN2) family
           protein [Arabidopsis thaliana]
          Length = 678

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = -2

Query: 280 FVVVLLAVASICDAVAVFHPIAESHRSAALELFSPTAVSFSSLEEAID 137
           F+V++LAVA IC A +VF PI++SHRSAAL++F P   S+ SLEEA +
Sbjct: 8   FLVLILAVA-ICGAASVFQPISDSHRSAALDVFVPVDGSYKSLEEAYE 54


>ref|NP_193847.2| ribophorin II (RPN2) family protein [Arabidopsis thaliana]
           gi|334186764|ref|NP_001190785.1| ribophorin II (RPN2)
           family protein [Arabidopsis thaliana]
           gi|75163691|sp|Q93Z16.1|RPN2_ARATH RecName:
           Full=Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit 2; AltName: Full=Protein
           HAPLESS 6; AltName: Full=Ribophorin II; Short=RPN-II;
           AltName: Full=Ribophorin-2; Flags: Precursor
           gi|16604454|gb|AAL24233.1| AT4g21150/F7J7_90
           [Arabidopsis thaliana] gi|18958022|gb|AAL79584.1|
           AT4g21150/F7J7_90 [Arabidopsis thaliana]
           gi|332659008|gb|AEE84408.1| ribophorin II (RPN2) family
           protein [Arabidopsis thaliana]
           gi|332659010|gb|AEE84410.1| ribophorin II (RPN2) family
           protein [Arabidopsis thaliana]
          Length = 691

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = -2

Query: 280 FVVVLLAVASICDAVAVFHPIAESHRSAALELFSPTAVSFSSLEEAID 137
           F+V++LAVA IC A +VF PI++SHRSAAL++F P   S+ SLEEA +
Sbjct: 9   FLVLILAVA-ICGAASVFQPISDSHRSAALDVFVPVDGSYKSLEEAYE 55


Top