BLASTX nr result

ID: Atractylodes21_contig00022844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022844
         (1085 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]   478   e-132
ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform ...   457   e-126
ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula] gi...   455   e-126
gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK...   454   e-125
ref|XP_002325124.1| f-box family protein [Populus trichocarpa] g...   436   e-120

>ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]
          Length = 308

 Score =  478 bits (1229), Expect = e-132
 Identities = 227/311 (72%), Positives = 259/311 (83%)
 Frame = +2

Query: 23  INHQGGEEADESGLYSGWAELTHECLLNILARLSLEDRWRGAMLVCKSWLHASRDSSLHS 202
           +++QGG+   +S L S W+ELTHECL N+L+RL+L DRW G MLVCKSWLHA +D SL S
Sbjct: 1   MDNQGGQA--DSELNSDWSELTHECLTNVLSRLTLHDRWTGPMLVCKSWLHACKDPSLFS 58

Query: 203 VFDLESSFESRPSESIRWWTPDFERKIDNMLRSVMDWSDGGLAEIRVRHCSDRALSLVAQ 382
             DLE  F+S P+ES RWWTP+FERKID MLRS+ +WS G + EIRVRHCSDR+LS  A 
Sbjct: 59  TLDLEVHFDS-PTESARWWTPEFERKIDAMLRSIAEWSGGSITEIRVRHCSDRSLSFAAD 117

Query: 383 RCPNLEVLSIKSCPNVTDESMVKLASGCPRLRELDISYCYEISHESLVMLGRKCTNIVIL 562
           RC NLEVLSIKSCPNVTD SM ++A  C +LRE+DISYCYEISHESL++LGR C N+ IL
Sbjct: 118 RCSNLEVLSIKSCPNVTDASMARVAFRCLKLREVDISYCYEISHESLILLGRNCPNLKIL 177

Query: 563 KRNLMNWLDPSQHIGIVPSDYLNACPQDGDSEAAAIGNLMPQLLHLELRFSKLSVKGLGL 742
           KRNLMNWLDPSQHIGIVP++YLNACPQDGDSEAAAIG  MP L HLELRFSK+S KGL L
Sbjct: 178 KRNLMNWLDPSQHIGIVPNEYLNACPQDGDSEAAAIGKTMPHLEHLELRFSKISAKGLAL 237

Query: 743 ISEGCQNLEYLDLSGCVSVTSRDIANAASKLSKLKNIKKPNFYIPRSVFHTERYGHWRLY 922
           I +GC NLEYLDLSGC ++TSRDIANA S L  LK I+KPNFYIPRSVFH ERYGHWRLY
Sbjct: 238 ICDGCLNLEYLDLSGCANLTSRDIANATSNLKNLKKIEKPNFYIPRSVFHAERYGHWRLY 297

Query: 923 DERFQTDAFRI 955
           D+RFQTD FRI
Sbjct: 298 DDRFQTDTFRI 308


>ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform 1 [Glycine max]
          Length = 306

 Score =  457 bits (1176), Expect = e-126
 Identities = 213/304 (70%), Positives = 251/304 (82%)
 Frame = +2

Query: 44  EADESGLYSGWAELTHECLLNILARLSLEDRWRGAMLVCKSWLHASRDSSLHSVFDLESS 223
           E + +   S W+ELT ECL+NIL+RLS+EDRWRG MLVCKSW    ++ SLH VF+L+  
Sbjct: 4   ETEPNETESDWSELTRECLINILSRLSVEDRWRGTMLVCKSWFSVFKEPSLHFVFNLDPQ 63

Query: 224 FESRPSESIRWWTPDFERKIDNMLRSVMDWSDGGLAEIRVRHCSDRALSLVAQRCPNLEV 403
           F+S P+ES RWWTP+FE KIDNMLRSV++W+   L  IR+RHCSDR+L+LVAQ CPNLEV
Sbjct: 64  FDS-PTESTRWWTPEFEAKIDNMLRSVVEWAQSSLTHIRIRHCSDRSLALVAQSCPNLEV 122

Query: 404 LSIKSCPNVTDESMVKLASGCPRLRELDISYCYEISHESLVMLGRKCTNIVILKRNLMNW 583
           L I+SCP VTD+S+ ++A  CP+LRELDISYCYEI+HESLV++GR C N+ +LKRNLMNW
Sbjct: 123 LFIRSCPRVTDDSISRIALSCPKLRELDISYCYEITHESLVLIGRNCPNLKVLKRNLMNW 182

Query: 584 LDPSQHIGIVPSDYLNACPQDGDSEAAAIGNLMPQLLHLELRFSKLSVKGLGLISEGCQN 763
           LDPSQH GIVP DYLNACPQDGD EAAAI N MP L  LE+RFSKL+ KGL  I +GC N
Sbjct: 183 LDPSQHRGIVPDDYLNACPQDGDDEAAAIANSMPGLEQLEIRFSKLTAKGLNSICQGCPN 242

Query: 764 LEYLDLSGCVSVTSRDIANAASKLSKLKNIKKPNFYIPRSVFHTERYGHWRLYDERFQTD 943
           LE+LDLSGC ++TSRDIANA+S L  LK IKKPNFYIPRSVFHTERYGHW LYDERFQTD
Sbjct: 243 LEFLDLSGCANLTSRDIANASSSLVHLKEIKKPNFYIPRSVFHTERYGHWSLYDERFQTD 302

Query: 944 AFRI 955
            F+I
Sbjct: 303 IFQI 306


>ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula]
           gi|355511349|gb|AES92491.1| F-box protein SKIP1
           [Medicago truncatula]
          Length = 302

 Score =  455 bits (1171), Expect = e-126
 Identities = 214/295 (72%), Positives = 253/295 (85%), Gaps = 1/295 (0%)
 Frame = +2

Query: 74  WAELTHECLLNILARLSLEDRWRGAMLVCKSWLHASRDS-SLHSVFDLESSFESRPSESI 250
           W ELT ECL+NIL+RLS ED+WRG++LVCKSW +A ++  SLHSVF+L+  F+ +P ES 
Sbjct: 9   WGELTRECLINILSRLSFEDQWRGSLLVCKSWFNAFKEEPSLHSVFNLDPYFD-KPLESP 67

Query: 251 RWWTPDFERKIDNMLRSVMDWSDGGLAEIRVRHCSDRALSLVAQRCPNLEVLSIKSCPNV 430
           RWWT  FE +ID+MLRS++ W+   L +IR+RHCSDR+L+LVAQRCPNLEVLSI+SCP V
Sbjct: 68  RWWTLQFESQIDSMLRSIVQWTHIFLTQIRIRHCSDRSLALVAQRCPNLEVLSIRSCPRV 127

Query: 431 TDESMVKLASGCPRLRELDISYCYEISHESLVMLGRKCTNIVILKRNLMNWLDPSQHIGI 610
           TD+SM K+A+GCP LRELDISYCYEI+HESLV++GR C+NI +LKRNLMNWLDPSQH+GI
Sbjct: 128 TDDSMSKIATGCPNLRELDISYCYEITHESLVLIGRNCSNIKVLKRNLMNWLDPSQHVGI 187

Query: 611 VPSDYLNACPQDGDSEAAAIGNLMPQLLHLELRFSKLSVKGLGLISEGCQNLEYLDLSGC 790
           VP DYLNACPQDGDSEAAAI N MP L  LE+RFSKL+ KGL  I +GC NLE+LDLSGC
Sbjct: 188 VPDDYLNACPQDGDSEAAAIANSMPHLEGLEIRFSKLTAKGLNSICQGCPNLEFLDLSGC 247

Query: 791 VSVTSRDIANAASKLSKLKNIKKPNFYIPRSVFHTERYGHWRLYDERFQTDAFRI 955
            ++TSRDIA A+S LS LK+IKKPNFYIPRSVFHTERYGHW LYDERFQTD FRI
Sbjct: 248 ANLTSRDIAKASSSLSHLKDIKKPNFYIPRSVFHTERYGHWSLYDERFQTDVFRI 302


>gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK45992.1| unknown
           [Medicago truncatula]
          Length = 302

 Score =  454 bits (1167), Expect = e-125
 Identities = 213/295 (72%), Positives = 252/295 (85%), Gaps = 1/295 (0%)
 Frame = +2

Query: 74  WAELTHECLLNILARLSLEDRWRGAMLVCKSWLHASRDS-SLHSVFDLESSFESRPSESI 250
           W ELT ECL+NIL+RLS ED+WRG++LVCKSW +A ++  SLHSVF+L+  F+ +P ES 
Sbjct: 9   WGELTRECLINILSRLSFEDQWRGSLLVCKSWFNAFKEEPSLHSVFNLDPYFD-KPLESP 67

Query: 251 RWWTPDFERKIDNMLRSVMDWSDGGLAEIRVRHCSDRALSLVAQRCPNLEVLSIKSCPNV 430
           RWWT  FE +ID+MLRS++ W+   L +IR+RHCSDR+L+LVAQRCPNLEVLSI+SCP V
Sbjct: 68  RWWTLQFESQIDSMLRSIVQWTHIFLTQIRIRHCSDRSLALVAQRCPNLEVLSIRSCPRV 127

Query: 431 TDESMVKLASGCPRLRELDISYCYEISHESLVMLGRKCTNIVILKRNLMNWLDPSQHIGI 610
           TD+SM K+A+GCP LRELDISYCYEI+HESLV++GR C+NI +LKRNLMNWLDPSQH+GI
Sbjct: 128 TDDSMSKIATGCPNLRELDISYCYEITHESLVLIGRNCSNIKVLKRNLMNWLDPSQHVGI 187

Query: 611 VPSDYLNACPQDGDSEAAAIGNLMPQLLHLELRFSKLSVKGLGLISEGCQNLEYLDLSGC 790
           VP DYLNACPQDGDSEA AI N MP L  LE+RFSKL+ KGL  I +GC NLE+LDLSGC
Sbjct: 188 VPDDYLNACPQDGDSEAVAIANSMPHLEGLEIRFSKLTAKGLNSICQGCPNLEFLDLSGC 247

Query: 791 VSVTSRDIANAASKLSKLKNIKKPNFYIPRSVFHTERYGHWRLYDERFQTDAFRI 955
            ++TSRDIA A+S LS LK+IKKPNFYIPRSVFHTERYGHW LYDERFQTD FRI
Sbjct: 248 ANLTSRDIAKASSSLSHLKDIKKPNFYIPRSVFHTERYGHWSLYDERFQTDVFRI 302


>ref|XP_002325124.1| f-box family protein [Populus trichocarpa]
           gi|222866558|gb|EEF03689.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score =  436 bits (1122), Expect = e-120
 Identities = 208/301 (69%), Positives = 243/301 (80%)
 Frame = +2

Query: 53  ESGLYSGWAELTHECLLNILARLSLEDRWRGAMLVCKSWLHASRDSSLHSVFDLESSFES 232
           ESGL + WAELT+ECL+ IL+RL+ E RWRG MLVCK WL A +D SL+++FDL++ F+S
Sbjct: 15  ESGLIADWAELTYECLIIILSRLTFEHRWRGPMLVCKGWLIACKDPSLNTLFDLDTQFDS 74

Query: 233 RPSESIRWWTPDFERKIDNMLRSVMDWSDGGLAEIRVRHCSDRALSLVAQRCPNLEVLSI 412
              ES RWWTPDFERKID+ML SV+ +SDG L EIR +HCSD +++  A+RC NL+VLSI
Sbjct: 75  -VIESPRWWTPDFERKIDSMLVSVITFSDGSLTEIRTQHCSDLSVTFAAERCSNLQVLSI 133

Query: 413 KSCPNVTDESMVKLASGCPRLRELDISYCYEISHESLVMLGRKCTNIVILKRNLMNWLDP 592
           KSC NVTD SM ++A  C +L+ELDISYC+EISHESLVM+GR C N+ +LKRN MNWLD 
Sbjct: 134 KSCRNVTDASMAQIAYKCAKLKELDISYCFEISHESLVMMGRNCPNLRVLKRNQMNWLDA 193

Query: 593 SQHIGIVPSDYLNACPQDGDSEAAAIGNLMPQLLHLELRFSKLSVKGLGLISEGCQNLEY 772
           S+H+GIVP  YLN CPQDGD EA AIG  MP L+HLELRFSK+S KGL  I EGC NLEY
Sbjct: 194 SEHVGIVPDSYLNTCPQDGDCEAGAIGKYMPNLVHLELRFSKMSAKGLVSICEGCLNLEY 253

Query: 773 LDLSGCVSVTSRDIANAASKLSKLKNIKKPNFYIPRSVFHTERYGHWRLYDERFQTDAFR 952
           LDLSGC ++TSRDI  A   L  LK IKKPNFYIPRSVFHTERYGHWRLYDERFQTD FR
Sbjct: 254 LDLSGCANLTSRDIVKATLGLKNLKEIKKPNFYIPRSVFHTERYGHWRLYDERFQTDIFR 313

Query: 953 I 955
           I
Sbjct: 314 I 314


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