BLASTX nr result

ID: Atractylodes21_contig00022834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022834
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330572.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-34
ref|XP_002264198.1| PREDICTED: uncharacterized WD repeat-contain...   110   7e-34
ref|XP_002299079.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-32
ref|XP_002882817.1| WD-40 repeat family protein [Arabidopsis lyr...   106   6e-32
ref|NP_566453.1| transducin/WD40 domain-containing protein [Arab...   105   9e-31

>ref|XP_002330572.1| predicted protein [Populus trichocarpa] gi|222872130|gb|EEF09261.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  111 bits (277), Expect(2) = 7e-34
 Identities = 52/62 (83%), Positives = 55/62 (88%)
 Frame = +3

Query: 318 IQGIPWERLSITREKYRQTRLEQYKNYENIPQSGEGLEKQCKITNKGGFFYEFRCNSRSV 497
           IQGIPWERLSITR+KYRQTRLEQYKNYENIP SGE  +K CKIT KGG +YEFR NSRSV
Sbjct: 64  IQGIPWERLSITRDKYRQTRLEQYKNYENIPHSGEDSKKDCKITEKGGMYYEFRRNSRSV 123

Query: 498 KS 503
           KS
Sbjct: 124 KS 125



 Score = 57.8 bits (138), Expect(2) = 7e-34
 Identities = 26/41 (63%), Positives = 35/41 (85%)
 Frame = +1

Query: 103 DDNMDDEFHSRHTGGSDSEVDEYDHMNHKLADTSAAQARRG 225
           DD+MD+EF +R  G SDS++DEYD++N+K+ADTSAA AR G
Sbjct: 22  DDDMDEEFRAREMG-SDSDIDEYDYLNNKVADTSAADARNG 61


>ref|XP_002264198.1| PREDICTED: uncharacterized WD repeat-containing protein C2A9.03
           [Vitis vinifera] gi|296090035|emb|CBI39854.3| unnamed
           protein product [Vitis vinifera]
          Length = 442

 Score =  110 bits (275), Expect(2) = 7e-34
 Identities = 49/62 (79%), Positives = 57/62 (91%)
 Frame = +3

Query: 318 IQGIPWERLSITREKYRQTRLEQYKNYENIPQSGEGLEKQCKITNKGGFFYEFRCNSRSV 497
           IQGIPWERL+ITREKYRQTR+EQYKNYENIP+SG+G  K+CK+T KGG FYEF+ N+RSV
Sbjct: 61  IQGIPWERLTITREKYRQTRVEQYKNYENIPRSGDGSAKECKVTKKGGLFYEFKHNARSV 120

Query: 498 KS 503
           KS
Sbjct: 121 KS 122



 Score = 58.5 bits (140), Expect(2) = 7e-34
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +1

Query: 106 DNMDDEFHSRHTGGSDSEVDEYDHMNHKLADTSAAQARRG 225
           D++D+EFH R  GG +SEVD YD++N K ADT +AQARRG
Sbjct: 19  DDLDEEFHDREMGGPESEVDVYDYLNSKTADTCSAQARRG 58


>ref|XP_002299079.1| predicted protein [Populus trichocarpa] gi|222846337|gb|EEE83884.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  110 bits (276), Expect(2) = 1e-32
 Identities = 52/62 (83%), Positives = 54/62 (87%)
 Frame = +3

Query: 318 IQGIPWERLSITREKYRQTRLEQYKNYENIPQSGEGLEKQCKITNKGGFFYEFRCNSRSV 497
           IQGIPWERLS+TREKYRQTRLEQYKNYENIP SGE   K CKIT KGG +YEFR NSRSV
Sbjct: 64  IQGIPWERLSVTREKYRQTRLEQYKNYENIPHSGEVSRKDCKITKKGGLYYEFRRNSRSV 123

Query: 498 KS 503
           KS
Sbjct: 124 KS 125



 Score = 54.3 bits (129), Expect(2) = 1e-32
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = +1

Query: 103 DDNMDDEFHSRHTGGSDSEVDEYDHMNHKLADTSAAQARRG 225
           DD+MD+EF +R  G SDS+VDEYD+ N+K+AD SAA AR G
Sbjct: 22  DDDMDEEFRAREMG-SDSDVDEYDYPNNKVADMSAADARNG 61


>ref|XP_002882817.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328657|gb|EFH59076.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 447

 Score =  106 bits (265), Expect(2) = 6e-32
 Identities = 48/62 (77%), Positives = 54/62 (87%)
 Frame = +3

Query: 318 IQGIPWERLSITREKYRQTRLEQYKNYENIPQSGEGLEKQCKITNKGGFFYEFRCNSRSV 497
           IQGIPW+RLSI+REKYRQTRLEQYKNYEN+P SGE  EK CK+T KGG FY+F  NSRS+
Sbjct: 66  IQGIPWDRLSISREKYRQTRLEQYKNYENVPNSGESSEKVCKVTQKGGLFYDFWRNSRSI 125

Query: 498 KS 503
           KS
Sbjct: 126 KS 127



 Score = 55.8 bits (133), Expect(2) = 6e-32
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = +1

Query: 103 DDNMDDEFHSRHTGGSDSEVDEYDHMNHKLADTSAAQARRG 225
           +D+MDDEF     G SDS+V+E+D+ N+K+ADTSA QAR+G
Sbjct: 23  EDDMDDEFRGDDLGASDSDVEEFDYSNNKVADTSAEQARKG 63


>ref|NP_566453.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|334185312|ref|NP_001189878.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
           gi|15081811|gb|AAK82560.1| AT3g13340/MDC11_13
           [Arabidopsis thaliana] gi|22655036|gb|AAM98109.1|
           At3g13340/MDC11_13 [Arabidopsis thaliana]
           gi|332641814|gb|AEE75335.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
           gi|332641815|gb|AEE75336.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 447

 Score =  105 bits (262), Expect(2) = 9e-31
 Identities = 47/62 (75%), Positives = 54/62 (87%)
 Frame = +3

Query: 318 IQGIPWERLSITREKYRQTRLEQYKNYENIPQSGEGLEKQCKITNKGGFFYEFRCNSRSV 497
           IQGIPW+RL+I+REKYRQTRLEQYKNYEN+P SGE  EK CK+T KGG FY+F  NSRS+
Sbjct: 66  IQGIPWDRLNISREKYRQTRLEQYKNYENVPNSGESSEKVCKVTQKGGLFYDFWRNSRSI 125

Query: 498 KS 503
           KS
Sbjct: 126 KS 127



 Score = 53.1 bits (126), Expect(2) = 9e-31
 Identities = 22/41 (53%), Positives = 33/41 (80%)
 Frame = +1

Query: 103 DDNMDDEFHSRHTGGSDSEVDEYDHMNHKLADTSAAQARRG 225
           +D+MD+EF     G SDS+V+E+D+ N+K+ADT+A QAR+G
Sbjct: 23  EDDMDEEFRGDDLGASDSDVEEFDYSNNKVADTTAEQARKG 63


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