BLASTX nr result

ID: Atractylodes21_contig00022778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022778
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32873.3| unnamed protein product [Vitis vinifera]              100   9e-20
ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-conta...   100   9e-20
ref|XP_003598475.1| Zinc finger protein [Medicago truncatula] gi...    91   7e-17
ref|XP_002533583.1| zinc finger protein, putative [Ricinus commu...    91   1e-16
ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersi...    91   1e-16

>emb|CBI32873.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/73 (68%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
 Frame = -3

Query: 214 KHVRDNHEKSGSHVYTLGDFVEADEQFQSRPRGGMKRKLPATIDTLMRKRVLPPSQSNCI 35
           KHVRDNHEK+G HVYT GDF E DEQF+ RP+GG KRK P  I+ L+RKRV PPSQS+ I
Sbjct: 313 KHVRDNHEKTGCHVYTHGDFEELDEQFRLRPKGGRKRKSP-PIEALLRKRVTPPSQSDSI 371

Query: 34  --QAPDYISWLLS 2
             Q P+Y+SWLLS
Sbjct: 372 LCQGPEYLSWLLS 384


>ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-containing protein 10-like
           [Vitis vinifera]
          Length = 370

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/73 (68%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
 Frame = -3

Query: 214 KHVRDNHEKSGSHVYTLGDFVEADEQFQSRPRGGMKRKLPATIDTLMRKRVLPPSQSNCI 35
           KHVRDNHEK+G HVYT GDF E DEQF+ RP+GG KRK P  I+ L+RKRV PPSQS+ I
Sbjct: 293 KHVRDNHEKTGCHVYTHGDFEELDEQFRLRPKGGRKRKSP-PIEALLRKRVTPPSQSDSI 351

Query: 34  --QAPDYISWLLS 2
             Q P+Y+SWLLS
Sbjct: 352 LCQGPEYLSWLLS 364


>ref|XP_003598475.1| Zinc finger protein [Medicago truncatula]
           gi|355487523|gb|AES68726.1| Zinc finger protein
           [Medicago truncatula]
          Length = 395

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 39/56 (69%), Positives = 48/56 (85%)
 Frame = -3

Query: 214 KHVRDNHEKSGSHVYTLGDFVEADEQFQSRPRGGMKRKLPATIDTLMRKRVLPPSQ 47
           KHVRDNHEK+  H + LGDF EADE+F+SRPRGG+KRK P T++ L+RKRV+PPSQ
Sbjct: 329 KHVRDNHEKTAKHAFALGDFEEADEEFRSRPRGGVKRKCPPTVEMLVRKRVIPPSQ 384


>ref|XP_002533583.1| zinc finger protein, putative [Ricinus communis]
           gi|223526542|gb|EEF28801.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 367

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/71 (61%), Positives = 54/71 (76%)
 Frame = -3

Query: 214 KHVRDNHEKSGSHVYTLGDFVEADEQFQSRPRGGMKRKLPATIDTLMRKRVLPPSQSNCI 35
           KHVRDNHEKSG HVYT GDF E+DEQF+SRPRGG KRK P T++ L+RKRV PP+  +  
Sbjct: 296 KHVRDNHEKSGCHVYTPGDFEESDEQFRSRPRGGRKRKCP-TVEMLIRKRVTPPADLD-- 352

Query: 34  QAPDYISWLLS 2
              +Y++W  S
Sbjct: 353 ---EYLTWFQS 360


>ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersicum]
           gi|115279797|gb|ABI85391.1| transcription factor IIIA
           [Solanum lycopersicum] gi|115279800|gb|ABI85393.1|
           transcription factor IIIA [Solanum lycopersicum]
          Length = 372

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/73 (60%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
 Frame = -3

Query: 214 KHVRDNHEKSGSHVYTLGDFVEADEQFQSRPRGGMKRKLPATIDTLMRKRVLPPSQSNCI 35
           KHVRD HE+SG HVYT GDF E DEQF SRPRGG KR+ P   +++MRKR+ PPS  + +
Sbjct: 294 KHVRDKHEQSGCHVYTPGDFEEVDEQFLSRPRGGRKRE-PTLFESIMRKRITPPSGIDPV 352

Query: 34  --QAPDYISWLLS 2
             Q P+Y+SWL S
Sbjct: 353 FNQTPEYLSWLRS 365


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