BLASTX nr result

ID: Atractylodes21_contig00022759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022759
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71589.1| hypothetical protein VITISV_017691 [Vitis vinifera]   131   5e-29
emb|CBI27450.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002270763.1| PREDICTED: uncharacterized protein LOC100247...   130   1e-28
ref|XP_002312241.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|NP_683575.2| RING/U-box-containing protein-like protein [Ara...   127   7e-28

>emb|CAN71589.1| hypothetical protein VITISV_017691 [Vitis vinifera]
          Length = 146

 Score =  131 bits (330), Expect = 5e-29
 Identities = 65/94 (69%), Positives = 75/94 (79%), Gaps = 8/94 (8%)
 Frame = +2

Query: 2   RLFHNATMRKQRKEVGDRW--------VNGDVTPENGAHRCVQYPFSVNEKVLIKGNRRT 157
           RLFHNA +RK+RKEVGD+          NGD+T ++G HR VQYPFSVNEKV+IKGNRRT
Sbjct: 27  RLFHNAALRKRRKEVGDQTDSIRRLNRENGDITADDGMHRGVQYPFSVNEKVIIKGNRRT 86

Query: 158 PEKFVGKEAIIASQSLNGWYLVNIIESGEKVRLQ 259
           P+KFVGKEA+I SQ LNGWYL+ II SGE VRLQ
Sbjct: 87  PDKFVGKEAVITSQCLNGWYLLKIIGSGESVRLQ 120


>emb|CBI27450.3| unnamed protein product [Vitis vinifera]
          Length = 510

 Score =  130 bits (326), Expect = 1e-28
 Identities = 64/94 (68%), Positives = 75/94 (79%), Gaps = 8/94 (8%)
 Frame = +2

Query: 2   RLFHNATMRKQRKEVGDRW--------VNGDVTPENGAHRCVQYPFSVNEKVLIKGNRRT 157
           RLFHNA +RK+RKEVGD+          NGD++ ++G HR VQYPFSVNEKV+IKGNRRT
Sbjct: 391 RLFHNAALRKRRKEVGDQTDSIRRLNRENGDISADDGMHRGVQYPFSVNEKVIIKGNRRT 450

Query: 158 PEKFVGKEAIIASQSLNGWYLVNIIESGEKVRLQ 259
           P+KFVGKEA+I SQ LNGWYL+ II SGE VRLQ
Sbjct: 451 PDKFVGKEAVITSQCLNGWYLLKIIGSGESVRLQ 484


>ref|XP_002270763.1| PREDICTED: uncharacterized protein LOC100247878 [Vitis vinifera]
          Length = 597

 Score =  130 bits (326), Expect = 1e-28
 Identities = 64/94 (68%), Positives = 75/94 (79%), Gaps = 8/94 (8%)
 Frame = +2

Query: 2   RLFHNATMRKQRKEVGDRW--------VNGDVTPENGAHRCVQYPFSVNEKVLIKGNRRT 157
           RLFHNA +RK+RKEVGD+          NGD++ ++G HR VQYPFSVNEKV+IKGNRRT
Sbjct: 478 RLFHNAALRKRRKEVGDQTDSIRRLNRENGDISADDGMHRGVQYPFSVNEKVIIKGNRRT 537

Query: 158 PEKFVGKEAIIASQSLNGWYLVNIIESGEKVRLQ 259
           P+KFVGKEA+I SQ LNGWYL+ II SGE VRLQ
Sbjct: 538 PDKFVGKEAVITSQCLNGWYLLKIIGSGESVRLQ 571


>ref|XP_002312241.1| predicted protein [Populus trichocarpa] gi|222852061|gb|EEE89608.1|
           predicted protein [Populus trichocarpa]
          Length = 589

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/95 (68%), Positives = 74/95 (77%), Gaps = 9/95 (9%)
 Frame = +2

Query: 2   RLFHNATMRKQRKEVGDRW---------VNGDVTPENGAHRCVQYPFSVNEKVLIKGNRR 154
           RLFHNAT+RK+RKE+GD            NGD+  ++G HR VQYPF+VNEKV+IKGNRR
Sbjct: 469 RLFHNATLRKRRKEMGDHTDSMKKRPHGENGDIAADDGLHRGVQYPFAVNEKVVIKGNRR 528

Query: 155 TPEKFVGKEAIIASQSLNGWYLVNIIESGEKVRLQ 259
           TPEKFVGKEAII SQ LNGWYL+ II SGE VRLQ
Sbjct: 529 TPEKFVGKEAIITSQCLNGWYLLKIIGSGENVRLQ 563


>ref|NP_683575.2| RING/U-box-containing protein-like protein [Arabidopsis thaliana]
           gi|26452927|dbj|BAC43540.1| unknown protein [Arabidopsis
           thaliana] gi|332642784|gb|AEE76305.1|
           RING/U-box-containing protein-like protein [Arabidopsis
           thaliana]
          Length = 554

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/88 (69%), Positives = 72/88 (81%), Gaps = 2/88 (2%)
 Frame = +2

Query: 2   RLFHNATMRKQRKEVGDRW--VNGDVTPENGAHRCVQYPFSVNEKVLIKGNRRTPEKFVG 175
           RLFHNA MR++RKE+ D+    NGD   ++G HR V YPF+VNEKVLIKGNRRTPEKFVG
Sbjct: 441 RLFHNAAMRRRRKEMSDQMDVENGDPATDDGMHRVVHYPFAVNEKVLIKGNRRTPEKFVG 500

Query: 176 KEAIIASQSLNGWYLVNIIESGEKVRLQ 259
           KEAI+ SQ LNGWYL+ I+ESG+ VRLQ
Sbjct: 501 KEAIVTSQCLNGWYLLKIVESGDNVRLQ 528


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