BLASTX nr result

ID: Atractylodes21_contig00022744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022744
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...   268   3e-70
ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotei...   267   6e-70
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...   267   6e-70
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h...   265   3e-69
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...   262   2e-68

>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
            putative [Ricinus communis]
          Length = 1809

 Score =  268 bits (685), Expect = 3e-70
 Identities = 123/140 (87%), Positives = 134/140 (95%)
 Frame = -2

Query: 420  ELVRAPKLGRNLHRCIHQFPKLNLAAHVQPITRTILRVELTITPDFQWEDRIHGYVEPFW 241
            EL+R PK+GR LH+ IHQFPKLNLAAHVQPITRT+LRVELTITPDFQWED++HGYVEPFW
Sbjct: 827  ELIRFPKMGRTLHKFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFW 886

Query: 240  VIVEDNNGEYILHNEYFLLKKQYIDEDHTLNFTVPICEPLPPQYFIKVVSDKWLGSLSVL 61
            VIVEDN+GEYILH+EYF+LKKQYIDEDHTLNFTVPI EPLPPQYFI+VVSDKWLGS +VL
Sbjct: 887  VIVEDNDGEYILHHEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVL 946

Query: 60   PVSFCHLILPEKYPPPTELL 1
            PVSF HLILPEKYPPPTELL
Sbjct: 947  PVSFRHLILPEKYPPPTELL 966


>ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  267 bits (683), Expect = 6e-70
 Identities = 123/140 (87%), Positives = 134/140 (95%)
 Frame = -2

Query: 420  ELVRAPKLGRNLHRCIHQFPKLNLAAHVQPITRTILRVELTITPDFQWEDRIHGYVEPFW 241
            EL+RAPK+GR LH+ IHQFPKLNLAAHVQPITRT+LRVELTITPDF W+DRIHGYVEPFW
Sbjct: 1199 ELIRAPKMGRTLHKFIHQFPKLNLAAHVQPITRTVLRVELTITPDFAWDDRIHGYVEPFW 1258

Query: 240  VIVEDNNGEYILHNEYFLLKKQYIDEDHTLNFTVPICEPLPPQYFIKVVSDKWLGSLSVL 61
            VIVEDN+GEYILH+EYF+LKKQYIDEDHTLNFTVPI EPLPPQYFI+VVSD+WLGS +VL
Sbjct: 1259 VIVEDNDGEYILHHEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVL 1318

Query: 60   PVSFCHLILPEKYPPPTELL 1
            PVSF HLILPEKYPPPTELL
Sbjct: 1319 PVSFRHLILPEKYPPPTELL 1338


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  267 bits (683), Expect = 6e-70
 Identities = 123/140 (87%), Positives = 134/140 (95%)
 Frame = -2

Query: 420  ELVRAPKLGRNLHRCIHQFPKLNLAAHVQPITRTILRVELTITPDFQWEDRIHGYVEPFW 241
            EL+RAPK+GR LH+ IHQFPKLNLAAHVQPITRT+LRVELTITPDF W+DRIHGYVEPFW
Sbjct: 1199 ELIRAPKMGRTLHKFIHQFPKLNLAAHVQPITRTVLRVELTITPDFAWDDRIHGYVEPFW 1258

Query: 240  VIVEDNNGEYILHNEYFLLKKQYIDEDHTLNFTVPICEPLPPQYFIKVVSDKWLGSLSVL 61
            VIVEDN+GEYILH+EYF+LKKQYIDEDHTLNFTVPI EPLPPQYFI+VVSD+WLGS +VL
Sbjct: 1259 VIVEDNDGEYILHHEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVL 1318

Query: 60   PVSFCHLILPEKYPPPTELL 1
            PVSF HLILPEKYPPPTELL
Sbjct: 1319 PVSFRHLILPEKYPPPTELL 1338


>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
            truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
            ribonucleoprotein 200 kDa helicase [Medicago truncatula]
          Length = 2223

 Score =  265 bits (677), Expect = 3e-69
 Identities = 123/140 (87%), Positives = 133/140 (95%)
 Frame = -2

Query: 420  ELVRAPKLGRNLHRCIHQFPKLNLAAHVQPITRTILRVELTITPDFQWEDRIHGYVEPFW 241
            EL+RAPK+GR LHR IHQFPKLNLAAHVQPITRT+L VELTITPDF W+DR+HGYVEPFW
Sbjct: 1244 ELIRAPKMGRTLHRFIHQFPKLNLAAHVQPITRTVLGVELTITPDFAWDDRMHGYVEPFW 1303

Query: 240  VIVEDNNGEYILHNEYFLLKKQYIDEDHTLNFTVPICEPLPPQYFIKVVSDKWLGSLSVL 61
            VIVEDN+GEYILH+EYFLLKKQYI+EDHTLNFTVPI EPLPPQYFI+VVSDKWLGS +VL
Sbjct: 1304 VIVEDNDGEYILHHEYFLLKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVL 1363

Query: 60   PVSFCHLILPEKYPPPTELL 1
            PVSF HLILPEKYPPPTELL
Sbjct: 1364 PVSFRHLILPEKYPPPTELL 1383


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Cucumis sativus]
          Length = 2175

 Score =  262 bits (670), Expect = 2e-68
 Identities = 118/140 (84%), Positives = 134/140 (95%)
 Frame = -2

Query: 420  ELVRAPKLGRNLHRCIHQFPKLNLAAHVQPITRTILRVELTITPDFQWEDRIHGYVEPFW 241
            EL+RAPK+GR LH+ IHQFPKLNLAAHVQPITRT+LRVELTITPDFQWED++HGYVE FW
Sbjct: 1192 ELIRAPKMGRTLHKFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVESFW 1251

Query: 240  VIVEDNNGEYILHNEYFLLKKQYIDEDHTLNFTVPICEPLPPQYFIKVVSDKWLGSLSVL 61
            V+VEDN+GE+I H+E+FLLKKQYIDEDHTLNFTVPICEPLPPQYFI+VVSD+WLGS ++L
Sbjct: 1252 VLVEDNDGEFIHHHEHFLLKKQYIDEDHTLNFTVPICEPLPPQYFIRVVSDRWLGSQTIL 1311

Query: 60   PVSFCHLILPEKYPPPTELL 1
            PVSF HLILPEK+PPPTELL
Sbjct: 1312 PVSFRHLILPEKFPPPTELL 1331


Top