BLASTX nr result

ID: Atractylodes21_contig00022706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022706
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301903.1| predicted protein [Populus trichocarpa] gi|2...   137   3e-30
ref|XP_002887637.1| hypothetical protein ARALYDRAFT_316562 [Arab...   136   5e-30
ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...   136   5e-30
ref|XP_004145558.1| PREDICTED: RING-H2 finger protein ATL80-like...   135   2e-29
ref|XP_003603861.1| RING-H2 finger protein ATL1B [Medicago trunc...   133   5e-29

>ref|XP_002301903.1| predicted protein [Populus trichocarpa] gi|222843629|gb|EEE81176.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  137 bits (345), Expect = 3e-30
 Identities = 83/202 (41%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
 Frame = +2

Query: 77  MSRRFRMLAGQNSTTTAVTEAPPDPD-NVDSDFXXXXXXXXXXXXXXXXXXXXXRCTWXX 253
           M+R F  L    +++   T +PP     VDSDF                     RC W  
Sbjct: 1   MARPFSFLNAVANSSATTTGSPPQASATVDSDFMVILAALLCALICVLGLIAVARCAWLR 60

Query: 254 XXXXXXXXXXTDQSPPAAANXXXXXXXXXXXXXXTYSTETMAEKFSDCAICLTEFVADDE 433
                         PP+ AN              T+S E  + K  DCAICLTEF A DE
Sbjct: 61  RFSSRNPTPPVPPPPPSVANKGLKKKVLRSLPKQTFS-EDFSGKLPDCAICLTEFSAGDE 119

Query: 434 IRVLPRCGHGFHVTCIDTWFGSHSSCPSCRQILVAAPRCKKCGELPATELT--------- 586
           IRVLP+CGHGFHV+CIDTW GSHSSCPSCRQILV A RC+KCG LP+   +         
Sbjct: 120 IRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVA-RCQKCGGLPSGSSSSNGGGGGGG 178

Query: 587 GAQTTTAG---ETSASIGRFLP 643
           GA+T T     E      RFLP
Sbjct: 179 GAETETEASLKEREDGANRFLP 200


>ref|XP_002887637.1| hypothetical protein ARALYDRAFT_316562 [Arabidopsis lyrata subsp.
           lyrata] gi|297333478|gb|EFH63896.1| hypothetical protein
           ARALYDRAFT_316562 [Arabidopsis lyrata subsp. lyrata]
          Length = 186

 Score =  136 bits (343), Expect = 5e-30
 Identities = 78/173 (45%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
 Frame = +2

Query: 89  FRMLAGQNSTTTAVTEAPPDPDNVDSDFXXXXXXXXXXXXXXXXXXXXXRCTWXXXXXXX 268
           FR+L   NST+    EAPP     +SD                      RC W       
Sbjct: 6   FRLLQETNSTSPP--EAPPP---FNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASR 60

Query: 269 XXXXXTDQSPPAAANXXXXXXXXXXXXXXTYSTETM-AEKFSDCAICLTEFVADDEIRVL 445
                T   P AAAN              TYS ++  AEK  +CAICLTEF A DE+RVL
Sbjct: 61  NRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVL 120

Query: 446 PRCGHGFHVTCIDTWFGSHSSCPSCRQILVAAPRCKKCGELPATELTGAQTTT 604
           P+CGHGFHV+CIDTW GSHSSCPSCRQILV A RC KCG LP +  +G++  T
Sbjct: 121 PQCGHGFHVSCIDTWLGSHSSCPSCRQILVVA-RCHKCGGLPGSSTSGSEPDT 172


>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
          Length = 184

 Score =  136 bits (343), Expect = 5e-30
 Identities = 84/191 (43%), Positives = 97/191 (50%), Gaps = 2/191 (1%)
 Frame = +2

Query: 77  MSRRFRMLAGQNSTTTAVTEAPPDPDNVDSDFXXXXXXXXXXXXXXXXXXXXXRCTWXXX 256
           M+   R L G NS+ TA  E+      VDSDF                     RC W   
Sbjct: 1   MTHPSRFLGGVNSSATASQESAA----VDSDFVVILAALLCALICVLGLVAVARCAWLRR 56

Query: 257 XXXXXXXXXTDQSPPAAANXXXXXXXXXXXXXXTYSTETMAEKFSDCAICLTEFVADDEI 436
                       +P   AN              TY+ ET A   +DCAICLTEFV  DEI
Sbjct: 57  ISGAANLPG-GSAPQTPANKGLKKKILRSLPKVTYAAET-AGNLTDCAICLTEFVGGDEI 114

Query: 437 RVLPRCGHGFHVTCIDTWFGSHSSCPSCRQILVAAPRCKKCGELPA-TELTGAQT-TTAG 610
           RVLP+CGHGFHV CIDTW GSH SCPSCRQILV A RC+KCG +PA +  TGA+T +   
Sbjct: 115 RVLPQCGHGFHVGCIDTWLGSHCSCPSCRQILVVA-RCQKCGGVPASSSSTGAETESRLK 173

Query: 611 ETSASIGRFLP 643
           E    + RFLP
Sbjct: 174 EREDDVNRFLP 184


>ref|XP_004145558.1| PREDICTED: RING-H2 finger protein ATL80-like [Cucumis sativus]
           gi|449530265|ref|XP_004172116.1| PREDICTED: RING-H2
           finger protein ATL80-like [Cucumis sativus]
          Length = 185

 Score =  135 bits (339), Expect = 2e-29
 Identities = 80/190 (42%), Positives = 96/190 (50%), Gaps = 3/190 (1%)
 Frame = +2

Query: 83  RRFRMLAGQNSTTTAVTEAPPDPDNVDSDFXXXXXXXXXXXXXXXXXXXXXRCTWXXXXX 262
           R FR LAG NS+ T+ T  P      DSDF                     RC W     
Sbjct: 2   RPFRYLAGVNSSATSDTFEP----RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLA 57

Query: 263 XXXXXXX-TDQSPPAAANXXXXXXXXXXXXXXTYSTETMAEKFSDCAICLTEFVADDEIR 439
                   T   PP A+N              T++ E  A+ FSDCAICL EF   DEIR
Sbjct: 58  GDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQ-FSDCAICLAEFAVGDEIR 116

Query: 440 VLPRCGHGFHVTCIDTWFGSHSSCPSCRQILVAAPRCKKCGELPATELT--GAQTTTAGE 613
           VLP+CGHGFH++CIDTWF SHSSCPSCRQILV + +C+KCG  PA+  +  G ++    E
Sbjct: 117 VLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVS-QCQKCGGFPASSSSNGGTESRVKEE 175

Query: 614 TSASIGRFLP 643
                 RFLP
Sbjct: 176 GDDKTNRFLP 185


>ref|XP_003603861.1| RING-H2 finger protein ATL1B [Medicago truncatula]
           gi|355492909|gb|AES74112.1| RING-H2 finger protein ATL1B
           [Medicago truncatula]
          Length = 193

 Score =  133 bits (335), Expect = 5e-29
 Identities = 82/184 (44%), Positives = 97/184 (52%), Gaps = 1/184 (0%)
 Frame = +2

Query: 77  MSRRFRMLAGQNSTTTAVTEAPPDPDNVDSDFXXXXXXXXXXXXXXXXXXXXXRCTWXXX 256
           M+R FR L   NS+++   ++P     VDSDF                     RC     
Sbjct: 1   MTRPFRFLGELNSSSS---DSPESSTVVDSDFVVILAALLCALICVLGLVAVTRCGCLRR 57

Query: 257 XXXXXXXXXTDQS-PPAAANXXXXXXXXXXXXXXTYSTETMAEKFSDCAICLTEFVADDE 433
                    T  + PPAAAN              T +TE  A KFSDCAICL+EF A DE
Sbjct: 58  LRLSSTTNNTSPAAPPAAANKGVKKKVLRSLPKLT-ATEESAVKFSDCAICLSEFTAGDE 116

Query: 434 IRVLPRCGHGFHVTCIDTWFGSHSSCPSCRQILVAAPRCKKCGELPATELTGAQTTTAGE 613
           IRVLP+CGHGFHV+CID W  SHSSCPSCRQILV + RC KCG +P      A TTTAG 
Sbjct: 117 IRVLPQCGHGFHVSCIDLWLRSHSSCPSCRQILVVS-RCDKCGGIPPP----ATTTTAGS 171

Query: 614 TSAS 625
           +S +
Sbjct: 172 SSTA 175