BLASTX nr result

ID: Atractylodes21_contig00022689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022689
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin...   127   7e-28
ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu...   120   1e-25
ref|XP_003616871.1| Zinc finger CCCH domain-containing protein [...   118   4e-25
emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]   115   4e-24
ref|XP_004143196.1| PREDICTED: zinc finger CCCH domain-containin...   109   2e-22

>ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
           vinifera] gi|297739220|emb|CBI28871.3| unnamed protein
           product [Vitis vinifera]
          Length = 450

 Score =  127 bits (320), Expect = 7e-28
 Identities = 58/84 (69%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
 Frame = +3

Query: 66  IEEAIRRLRIQPDGKENETG-STAYPDRPGEPDCIYYLRTGLCGYGDKCRFNHPTYDVQV 242
           +EEAI RL+I  + +E   G S+ YPDRPGEPDCIYYLRTGLCGYG  CRFNHP Y  Q 
Sbjct: 20  VEEAILRLKIHDNQEEGSVGHSSPYPDRPGEPDCIYYLRTGLCGYGSNCRFNHPAYSEQG 79

Query: 243 NQHGGDLPERVGEPDCVYFLKTGT 314
            Q+ G+LPERVG+PDC YFLKTGT
Sbjct: 80  AQYRGELPERVGQPDCGYFLKTGT 103


>ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
           gi|223531614|gb|EEF33442.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 456

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
 Frame = +3

Query: 66  IEEAIRRLRIQPDGKENETG-STAYPDRPGEPDCIYYLRTGLCGYGDKCRFNHPTYDVQV 242
           IEEAI RL+I  + ++     S+ YPDRPGEPDC+YYLRTGLCGYG+ CRFNHP Y  Q 
Sbjct: 27  IEEAIWRLKIHDNQEQGGMAPSSPYPDRPGEPDCVYYLRTGLCGYGNNCRFNHPPYAAQG 86

Query: 243 NQHGGDLPERVGEPDCVYFLKTGT 314
           NQ   +LPERVG+PDC Y+LKTGT
Sbjct: 87  NQFKEELPERVGQPDCGYYLKTGT 110


>ref|XP_003616871.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355518206|gb|AES99829.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 422

 Score =  118 bits (296), Expect = 4e-25
 Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
 Frame = +3

Query: 66  IEEAIRRLRIQPD-GKENETGSTAYPDRPGEPDCIYYLRTGLCGYGDKCRFNHPTYDVQV 242
           IEEAIRRL+I     ++    S  YPDRPGEPDC+YYLRTG+CGYG  CR+NHP     V
Sbjct: 20  IEEAIRRLKINSTRDRDAVPQSMPYPDRPGEPDCVYYLRTGMCGYGSNCRYNHPANISPV 79

Query: 243 NQHGGDLPERVGEPDCVYFLKTGT 314
            Q+G +LPERVG+PDC YFLKTGT
Sbjct: 80  TQYGEELPERVGQPDCEYFLKTGT 103



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
 Frame = +3

Query: 126 STAYPDRPGEPDCIYYLRTGLCGYGDKCRFNHP----TYDVQVNQHGGDLPERVGEPDCV 293
           +++ PDRP +PDC Y++ TG C YG  C+F+HP       + +N  G  LP R G   C 
Sbjct: 267 NSSLPDRPEQPDCKYFMSTGTCKYGSDCKFHHPKERIAQTLSINPLG--LPMRPGNAICS 324

Query: 294 YF 299
           Y+
Sbjct: 325 YY 326


>emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]
          Length = 460

 Score =  115 bits (288), Expect = 4e-24
 Identities = 49/63 (77%), Positives = 53/63 (84%)
 Frame = +3

Query: 126 STAYPDRPGEPDCIYYLRTGLCGYGDKCRFNHPTYDVQVNQHGGDLPERVGEPDCVYFLK 305
           S+ YPDRPGEPDCIYYLRTGLCGYG  CRFNHP Y  Q  Q+ G+LPERVG+PDC YFLK
Sbjct: 20  SSPYPDRPGEPDCIYYLRTGLCGYGSNCRFNHPAYSEQGAQYRGELPERVGQPDCGYFLK 79

Query: 306 TGT 314
           TGT
Sbjct: 80  TGT 82



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 8/66 (12%)
 Frame = +3

Query: 138 PDRPGEPDCIYYLRTGLCGYGDKCRFNHPTYDVQVNQHGG--------DLPERVGEPDCV 293
           P+R G+PDC Y+L+TG C YG  C+++HP      ++HG          LP R  E  C 
Sbjct: 66  PERVGQPDCGYFLKTGTCKYGSTCKYHHPR-----DRHGAGPVXLNIVGLPMRQEEKPCS 120

Query: 294 YFLKTG 311
           Y+++TG
Sbjct: 121 YYMRTG 126


>ref|XP_004143196.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
           [Cucumis sativus] gi|449515163|ref|XP_004164619.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           3-like [Cucumis sativus]
          Length = 430

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
 Frame = +3

Query: 66  IEEAIRRLRIQPDGKENETG-STAYPDRPGEPDCIYYLRTGLCGYGDKCRFNHPTYDVQV 242
           I EA+ RL I  +    +   S+ YPDRPGEPDC+YY+RTG C YG  CRFNHP Y  Q 
Sbjct: 19  ISEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVGQG 78

Query: 243 NQHGGDLPERVGEPDCVYFLKTGT 314
             + G+LPER+G+PDC YFLKTGT
Sbjct: 79  ALYNGELPERIGQPDCEYFLKTGT 102



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
 Frame = +3

Query: 138 PDRPGEPDCIYYLRTGLCGYGDKCRFNHP-----TYDVQVNQHGGDLPERVGEPDCVYFL 302
           P+R G+PDC Y+L+TG C YG  C+++HP        V  N  G  LP R  E  C Y+L
Sbjct: 86  PERIGQPDCEYFLKTGTCKYGGSCKYHHPRDRRGAGPVTFNILG--LPMRQEEKSCPYYL 143

Query: 303 KTGT 314
           +TG+
Sbjct: 144 RTGS 147



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = +3

Query: 120 TGSTAYPDRPGEPDCIYYLRTGLCGYGDKCRFNHPTYDV-QVNQHGGDLPERVGEPDCVY 296
           T +   PDRP +P+C Y++  G C YG  C+F+HP   + Q   +   LP R G+  C Y
Sbjct: 264 TSTPTLPDRPDQPECRYFMNNGTCKYGSDCKFHHPKQRIAQSATNALGLPSRPGQAICSY 323

Query: 297 F 299
           +
Sbjct: 324 Y 324


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