BLASTX nr result

ID: Atractylodes21_contig00022675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022675
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270960.2| PREDICTED: nucleoporin SEH1-like [Vitis vini...   342   1e-91
emb|CAN61200.1| hypothetical protein VITISV_003214 [Vitis vinifera]   342   1e-91
ref|XP_003538190.1| PREDICTED: nucleoporin SEH1-like [Glycine max]    322   8e-86
ref|XP_003517499.1| PREDICTED: nucleoporin SEH1-like [Glycine max]    319   5e-85
gb|AFK36046.1| unknown [Lotus japonicus]                              318   2e-84

>ref|XP_002270960.2| PREDICTED: nucleoporin SEH1-like [Vitis vinifera]
           gi|297742315|emb|CBI34464.3| unnamed protein product
           [Vitis vinifera]
          Length = 325

 Score =  342 bits (876), Expect = 1e-91
 Identities = 168/256 (65%), Positives = 198/256 (77%), Gaps = 2/256 (0%)
 Frame = +1

Query: 16  VQWKQCKSFGGSLDQVLDSQFGNS-TSLKLTIAYSNGHVKVYEILDPMDLKNWQLQAEFQ 192
           +QWK CKSFG + ++VLD QFG S TSLK+  AYS+GHVKVYE+LDP++LK+WQLQAEFQ
Sbjct: 95  LQWKLCKSFGSNSNKVLDVQFGVSPTSLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQ 154

Query: 193 NVTDSVTKFGKASCLSASISWNPQRSESRPASFVLGFTSDTPQLNSPKVWEFDQDHQRWL 372
           N +DSV+ FGKA CLSAS+SWNPQR ES+ +SFVLGF SDTPQLNS KVWEFDQ+HQRWL
Sbjct: 155 NASDSVSTFGKALCLSASVSWNPQRGESQQSSFVLGFHSDTPQLNSAKVWEFDQNHQRWL 214

Query: 373 PVAELSELGDKGDEVYAVAWASNIGRPFELIAVATSKGISIWQMASNPDPDGRLSIEKVV 552
           PVAEL+  GDKGD+V+ VAWA NIGRP+E++AVAT KGI+IW +  NPD DGRLS+E+V 
Sbjct: 215 PVAELALHGDKGDQVFTVAWAPNIGRPYEVMAVATHKGIAIWHLGLNPDIDGRLSVERVA 274

Query: 553 TFPCHD-KVWQMEWDMSGMTLATSGSDGRVRLXXXXXXXXXXXXXXXXXXSDGRVRLWQS 729
               HD +VWQMEWDMSGMTLAT+G                          DG VRLWQS
Sbjct: 275 LLSGHDGEVWQMEWDMSGMTLATTG-------------------------GDGMVRLWQS 309

Query: 730 NLNGVWHEQAVIEPTT 777
           NLNGVWHEQA +EPT+
Sbjct: 310 NLNGVWHEQAALEPTS 325


>emb|CAN61200.1| hypothetical protein VITISV_003214 [Vitis vinifera]
          Length = 325

 Score =  342 bits (876), Expect = 1e-91
 Identities = 168/256 (65%), Positives = 198/256 (77%), Gaps = 2/256 (0%)
 Frame = +1

Query: 16  VQWKQCKSFGGSLDQVLDSQFGNS-TSLKLTIAYSNGHVKVYEILDPMDLKNWQLQAEFQ 192
           +QWK CKSFG + ++VLD QFG S TSLK+  AYS+GHVKVYE+LDP++LK+WQLQAEFQ
Sbjct: 95  LQWKLCKSFGSNSNKVLDVQFGVSPTSLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQ 154

Query: 193 NVTDSVTKFGKASCLSASISWNPQRSESRPASFVLGFTSDTPQLNSPKVWEFDQDHQRWL 372
           N +DSV+ FGKA CLSAS+SWNPQR ES+ +SFVLGF SDTPQLNS KVWEFDQ+HQRWL
Sbjct: 155 NASDSVSTFGKALCLSASVSWNPQRGESQQSSFVLGFHSDTPQLNSAKVWEFDQNHQRWL 214

Query: 373 PVAELSELGDKGDEVYAVAWASNIGRPFELIAVATSKGISIWQMASNPDPDGRLSIEKVV 552
           PVAEL+  GDKGD+V+ VAWA NIGRP+E++AVAT KGI+IW +  NPD DGRLS+E+V 
Sbjct: 215 PVAELALHGDKGDQVFTVAWAPNIGRPYEVMAVATHKGIAIWHLGLNPDIDGRLSVERVA 274

Query: 553 TFPCHD-KVWQMEWDMSGMTLATSGSDGRVRLXXXXXXXXXXXXXXXXXXSDGRVRLWQS 729
               HD +VWQMEWDMSGMTLAT+G                          DG VRLWQS
Sbjct: 275 LLSGHDGEVWQMEWDMSGMTLATTG-------------------------GDGMVRLWQS 309

Query: 730 NLNGVWHEQAVIEPTT 777
           NLNGVWHEQA +EPT+
Sbjct: 310 NLNGVWHEQAALEPTS 325


>ref|XP_003538190.1| PREDICTED: nucleoporin SEH1-like [Glycine max]
          Length = 326

 Score =  322 bits (825), Expect = 8e-86
 Identities = 158/256 (61%), Positives = 191/256 (74%), Gaps = 2/256 (0%)
 Frame = +1

Query: 16  VQWKQCKSFGGSLDQVLDSQFGNS-TSLKLTIAYSNGHVKVYEILDPMDLKNWQLQAEFQ 192
           +QWK CKSFG S  +VLD QFG S  SLK+  AYS+G+V+V+E+ DP++L+NWQLQAEFQ
Sbjct: 96  LQWKMCKSFGNSSSKVLDVQFGISLASLKMVAAYSDGNVRVFELSDPLELRNWQLQAEFQ 155

Query: 193 NVTDSVTKFGKASCLSASISWNPQRSESRPASFVLGFTSDTPQLNSPKVWEFDQDHQRWL 372
           NV +SV+ FGKASCLSASISWNPQ+  S+ +SF++GF S+TP+LNS KVWEFDQ HQRWL
Sbjct: 156 NVIESVSSFGKASCLSASISWNPQKGGSQESSFLVGFNSNTPELNSSKVWEFDQAHQRWL 215

Query: 373 PVAELSELGDKGDEVYAVAWASNIGRPFELIAVATSKGISIWQMASNPDPDGRLSIEKVV 552
           PVAEL+   DKGD+VYAVAWA NIGRP+E+IAVAT KG++IW +  NPD DGRL +E+V 
Sbjct: 216 PVAELALPEDKGDQVYAVAWAPNIGRPYEIIAVATHKGLAIWHLGLNPDHDGRLPVERVA 275

Query: 553 TFPCHD-KVWQMEWDMSGMTLATSGSDGRVRLXXXXXXXXXXXXXXXXXXSDGRVRLWQS 729
               H+  VWQMEWDMSGMTLAT+G                          DG VRLWQS
Sbjct: 276 LLSGHEGMVWQMEWDMSGMTLATTG-------------------------HDGMVRLWQS 310

Query: 730 NLNGVWHEQAVIEPTT 777
           NLNGVWH+QA  EPT+
Sbjct: 311 NLNGVWHQQAAFEPTS 326


>ref|XP_003517499.1| PREDICTED: nucleoporin SEH1-like [Glycine max]
          Length = 326

 Score =  319 bits (818), Expect = 5e-85
 Identities = 156/256 (60%), Positives = 192/256 (75%), Gaps = 2/256 (0%)
 Frame = +1

Query: 16  VQWKQCKSFGGSLDQVLDSQFGNS-TSLKLTIAYSNGHVKVYEILDPMDLKNWQLQAEFQ 192
           +QWK CKSFG S  +VLD+QFG S TSLK+  AYS+G+V+V+E+ DP++L+NWQLQAEFQ
Sbjct: 96  LQWKMCKSFGNSSSKVLDAQFGISLTSLKMVAAYSDGNVRVFELSDPLELRNWQLQAEFQ 155

Query: 193 NVTDSVTKFGKASCLSASISWNPQRSESRPASFVLGFTSDTPQLNSPKVWEFDQDHQRWL 372
           NV +SV+ FGKASCLSASISWNPQ+  S+ +SF++GF S+T +LNS KVWEFDQ HQRWL
Sbjct: 156 NVIESVSSFGKASCLSASISWNPQKGGSQESSFLVGFNSNTSELNSSKVWEFDQAHQRWL 215

Query: 373 PVAELSELGDKGDEVYAVAWASNIGRPFELIAVATSKGISIWQMASNPDPDGRLSIEKVV 552
           PVAEL+   +KGD++YAVAWA NIGRP+E+IAVAT KG++IW +  NPD DGRL +E+V 
Sbjct: 216 PVAELALPEEKGDQLYAVAWAPNIGRPYEIIAVATHKGLAIWHLGLNPDHDGRLPVERVA 275

Query: 553 TFPCHD-KVWQMEWDMSGMTLATSGSDGRVRLXXXXXXXXXXXXXXXXXXSDGRVRLWQS 729
               H+  VWQMEWDMSGMTLAT+G                          DG VRLWQS
Sbjct: 276 LLSGHEGMVWQMEWDMSGMTLATTG-------------------------HDGMVRLWQS 310

Query: 730 NLNGVWHEQAVIEPTT 777
           NLNGVWH+QA  EPT+
Sbjct: 311 NLNGVWHQQAAFEPTS 326


>gb|AFK36046.1| unknown [Lotus japonicus]
          Length = 326

 Score =  318 bits (814), Expect = 2e-84
 Identities = 158/256 (61%), Positives = 188/256 (73%), Gaps = 2/256 (0%)
 Frame = +1

Query: 16  VQWKQCKSFGGSLDQVLDSQFGNS-TSLKLTIAYSNGHVKVYEILDPMDLKNWQLQAEFQ 192
           +QWK CK FG S D+VLD QFG S  SLK+  AYS+GH+KV+E+LDP++LKNWQLQAEFQ
Sbjct: 96  LQWKICKCFGSSSDKVLDVQFGISLASLKMVAAYSDGHMKVFELLDPLELKNWQLQAEFQ 155

Query: 193 NVTDSVTKFGKASCLSASISWNPQRSESRPASFVLGFTSDTPQLNSPKVWEFDQDHQRWL 372
           NV +SV+ FGKA CLSASIS+NPQ   S+ +SF++GF S+T +LNS KVWEFDQ HQRWL
Sbjct: 156 NVIESVSSFGKAVCLSASISFNPQNGGSQESSFLVGFNSNTSELNSAKVWEFDQAHQRWL 215

Query: 373 PVAELSELGDKGDEVYAVAWASNIGRPFELIAVATSKGISIWQMASNPDPDGRLSIEKVV 552
           PVAEL+   DKGD+VYAVAWA NIGR +E+IAVAT KG++IW +  NPD DGRL +E+V 
Sbjct: 216 PVAELAVAEDKGDQVYAVAWAPNIGRTYEIIAVATHKGLAIWHLGLNPDHDGRLPVERVA 275

Query: 553 TFPCHD-KVWQMEWDMSGMTLATSGSDGRVRLXXXXXXXXXXXXXXXXXXSDGRVRLWQS 729
               HD  VWQMEWDMSGMTLAT+G                          DG VRLWQS
Sbjct: 276 VLSGHDGMVWQMEWDMSGMTLATTG-------------------------QDGMVRLWQS 310

Query: 730 NLNGVWHEQAVIEPTT 777
           NLNGVWH+QA  EPT+
Sbjct: 311 NLNGVWHQQAAFEPTS 326


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