BLASTX nr result

ID: Atractylodes21_contig00022674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022674
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317924.1| predicted protein [Populus trichocarpa] gi|2...   236   4e-60
ref|XP_002511990.1| Single-stranded DNA-binding protein, mitocho...   234   2e-59
ref|XP_004137462.1| PREDICTED: single-stranded DNA-binding prote...   232   9e-59
ref|XP_002885264.1| single-strand-binding family protein [Arabid...   232   9e-59
ref|NP_188488.1| single-strand DNA-binding protein [Arabidopsis ...   231   1e-58

>ref|XP_002317924.1| predicted protein [Populus trichocarpa] gi|222858597|gb|EEE96144.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  236 bits (603), Expect = 4e-60
 Identities = 107/161 (66%), Positives = 139/161 (86%)
 Frame = -1

Query: 654 SSDSNDRKRDFVDRPLEKGLDAGIYKAILVGRVGQNAIEKKLKSGRTVTMVSIGTGGMRN 475
           +S+ +   R   DRPLE GLDAG+YKAILVG+VGQN ++KKL+SGR +T+ S+GTGG+RN
Sbjct: 60  TSEGSSGSRMVQDRPLENGLDAGVYKAILVGQVGQNPLQKKLRSGREITIFSMGTGGIRN 119

Query: 474 NRRPLQSEEPRDYANRSMVQWHRVSIYPERLGALVAKNAVPGSILYLEGNLETKIFNDPI 295
           NRRPLQ+E+PR+YANR  VQWHRVS+YPERLG +V +N +PGSILY+EGNLETK+F DPI
Sbjct: 120 NRRPLQNEDPREYANRCAVQWHRVSVYPERLGRVVMQNVLPGSILYVEGNLETKVFTDPI 179

Query: 294 TGLTRRVREIAIRRDGRVIFLGEGSNGQESHQAELKGVGYY 172
           TGL RR+REIA+R++GR++FLG+G+N Q++   ELKG+GYY
Sbjct: 180 TGLVRRIREIAVRQNGRLVFLGKGANDQQASSLELKGLGYY 220


>ref|XP_002511990.1| Single-stranded DNA-binding protein, mitochondrial precursor,
           putative [Ricinus communis] gi|223549170|gb|EEF50659.1|
           Single-stranded DNA-binding protein, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 223

 Score =  234 bits (597), Expect = 2e-59
 Identities = 113/222 (50%), Positives = 159/222 (71%), Gaps = 1/222 (0%)
 Frame = -1

Query: 834 SSLCRRICSSFFSTNPITRQHQSLLI-SLHHFXXXXXXXXXXXXXXXXTINPEPKSDPLS 658
           +++ RR+C S  S++ I++  +     +L                   +I+ +  S   S
Sbjct: 2   ANISRRLCRSLLSSSKISKFSKPFCTGNLSSREEEHDSDESTHNSDTDSISTQSPSSTSS 61

Query: 657 QSSDSNDRKRDFVDRPLEKGLDAGIYKAILVGRVGQNAIEKKLKSGRTVTMVSIGTGGMR 478
                +  +R+   RPLE GLD G+YKAILVG+VGQ+ ++KKL+SG++VTM S+GTGG+R
Sbjct: 62  PPPPESSPQREVYQRPLENGLDLGVYKAILVGQVGQSPLQKKLRSGKSVTMFSLGTGGIR 121

Query: 477 NNRRPLQSEEPRDYANRSMVQWHRVSIYPERLGALVAKNAVPGSILYLEGNLETKIFNDP 298
           NNRRP+Q+EEPR+YANR  VQWHRVS+YPERLG++V K+ +PGSI+YLEGNLETK+F DP
Sbjct: 122 NNRRPMQNEEPREYANRCAVQWHRVSVYPERLGSIVMKHLLPGSIMYLEGNLETKVFTDP 181

Query: 297 ITGLTRRVREIAIRRDGRVIFLGEGSNGQESHQAELKGVGYY 172
           ITGL RR+RE+AIR+DGR++FL +G + +E+   ELKG+GYY
Sbjct: 182 ITGLVRRIREVAIRQDGRIVFLAKGGDEKEASSKELKGLGYY 223


>ref|XP_004137462.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
           [Cucumis sativus] gi|449486863|ref|XP_004157425.1|
           PREDICTED: single-stranded DNA-binding protein,
           mitochondrial-like [Cucumis sativus]
          Length = 234

 Score =  232 bits (591), Expect = 9e-59
 Identities = 122/231 (52%), Positives = 156/231 (67%), Gaps = 11/231 (4%)
 Frame = -1

Query: 831 SLCRRICSSFFSTNPITRQHQSLLI----------SLHHFXXXXXXXXXXXXXXXXTINP 682
           +L RR+C S  S +  +  +  L +          S+                   ++  
Sbjct: 6   ALSRRLCRSLLSNSKASHHYDILPVTYCTNNLSFRSVSDITESGIESDLYTELDSNSVTN 65

Query: 681 EPKSDPLSQSSDSNDRKRDFVDRPLEKGLDAGIYKAILVGRVGQNAIEKKLKSGRTVTMV 502
           +P   P   SS S  + R   +RPLE GLDAGIYKAILVG+VGQ+ ++K+LKSGRTVT++
Sbjct: 66  QPSLSP--SSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTVTLL 123

Query: 501 SIGTGGMRNNRRPLQSEEPRDYANRSMVQWHRVSIYPERLGALVAKNAVPGSILYLEGNL 322
           S+GTGG+RNNRRPL +EEPR+YANR  VQWHRVSIYP RLG +V K+ VPGSILYLEGNL
Sbjct: 124 SVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLEGNL 183

Query: 321 ETKIFNDPITGLTRRVREIAIRRDGRVIFLGEG-SNGQESHQAELKGVGYY 172
           ETKIF D +TGL RR+RE+AIR +GR++FLG+G  N QES  +E +GVGYY
Sbjct: 184 ETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 234


>ref|XP_002885264.1| single-strand-binding family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297331104|gb|EFH61523.1|
           single-strand-binding family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 223

 Score =  232 bits (591), Expect = 9e-59
 Identities = 113/171 (66%), Positives = 142/171 (83%), Gaps = 1/171 (0%)
 Frame = -1

Query: 681 EPK-SDPLSQSSDSNDRKRDFVDRPLEKGLDAGIYKAILVGRVGQNAIEKKLKSGRTVTM 505
           EPK SDP+S+ S     +R   +RPLE GLD+GI+KAILVG+VGQ  ++KKLKSGRTVT+
Sbjct: 56  EPKASDPVSRFSGE---ERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKLKSGRTVTL 112

Query: 504 VSIGTGGMRNNRRPLQSEEPRDYANRSMVQWHRVSIYPERLGALVAKNAVPGSILYLEGN 325
            S+GTGG+RNNRRPL +E+PR+YA+RS VQWHRVS+YPERL  LV KN  PG+++YLEGN
Sbjct: 113 FSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLAELVLKNVEPGTVIYLEGN 172

Query: 324 LETKIFNDPITGLTRRVREIAIRRDGRVIFLGEGSNGQESHQAELKGVGYY 172
           LETKIF DP+TGL RR+RE+AIRR+GRV+FLG+  + Q+   AEL+GVGYY
Sbjct: 173 LETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSAELRGVGYY 223


>ref|NP_188488.1| single-strand DNA-binding protein [Arabidopsis thaliana]
           gi|9294319|dbj|BAB02216.1| unnamed protein product
           [Arabidopsis thaliana] gi|332642598|gb|AEE76119.1|
           single-strand DNA-binding protein [Arabidopsis thaliana]
          Length = 217

 Score =  231 bits (590), Expect = 1e-58
 Identities = 113/171 (66%), Positives = 142/171 (83%), Gaps = 1/171 (0%)
 Frame = -1

Query: 681 EPK-SDPLSQSSDSNDRKRDFVDRPLEKGLDAGIYKAILVGRVGQNAIEKKLKSGRTVTM 505
           EPK SDP+S+ S     +R   +RPLE GLD+GI+KAILVG+VGQ  ++KKLKSGRTVT+
Sbjct: 50  EPKASDPVSRFSGE---ERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKLKSGRTVTL 106

Query: 504 VSIGTGGMRNNRRPLQSEEPRDYANRSMVQWHRVSIYPERLGALVAKNAVPGSILYLEGN 325
            S+GTGG+RNNRRPL +E+PR+YA+RS VQWHRVS+YPERL  LV KN  PG+++YLEGN
Sbjct: 107 FSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPGTVIYLEGN 166

Query: 324 LETKIFNDPITGLTRRVREIAIRRDGRVIFLGEGSNGQESHQAELKGVGYY 172
           LETKIF DP+TGL RR+RE+AIRR+GRV+FLG+  + Q+   AEL+GVGYY
Sbjct: 167 LETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSAELRGVGYY 217


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