BLASTX nr result

ID: Atractylodes21_contig00022582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022582
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15196.3| unnamed protein product [Vitis vinifera]              192   2e-47
ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]   192   2e-47
ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containi...   178   5e-43
ref|XP_002310922.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42

>emb|CBI15196.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  192 bits (488), Expect = 2e-47
 Identities = 85/137 (62%), Positives = 111/137 (81%)
 Frame = -1

Query: 412 YGGVKNAHKVFDGMTERSVVTWNTLLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGC 233
           Y GV+ A +VFD + +R++V+WN+LL+GYV+C D+DGARR+F EMPERN+VSWTT+++GC
Sbjct: 81  YDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGC 140

Query: 232 VHNGRCKEALSLLREMLQARMELDQVTLVAALSACAEIGDLKMGSWIHSYIDRSWHMKNK 53
              GRCK+AL L  EM +A ++LDQV LVAALSACAE+GDLK+G+WIHSYID   H  N+
Sbjct: 141 AQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQ 200

Query: 52  ERTVLLNNALLHMYAGC 2
              V LNN+L+HMYA C
Sbjct: 201 PLLVSLNNSLIHMYASC 217



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
 Frame = -1

Query: 346 NTLLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGCVHNGRCKEALSLLREMLQARME 167
           N+L+  Y  C  ID A +VF  M +R+ +SWT++++G    G  +EAL + + M +   +
Sbjct: 208 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTD 267

Query: 166 ---LDQVTLVAALSACAEIGDLKMGSWIHSYIDRSW 68
               D +T +  L AC+  G +  G      +++ W
Sbjct: 268 EGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKW 303


>ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 553

 Score =  192 bits (488), Expect = 2e-47
 Identities = 85/137 (62%), Positives = 111/137 (81%)
 Frame = -1

Query: 412 YGGVKNAHKVFDGMTERSVVTWNTLLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGC 233
           Y GV+ A +VFD + +R++V+WN+LL+GYV+C D+DGARR+F EMPERN+VSWTT+++GC
Sbjct: 167 YDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGC 226

Query: 232 VHNGRCKEALSLLREMLQARMELDQVTLVAALSACAEIGDLKMGSWIHSYIDRSWHMKNK 53
              GRCK+AL L  EM +A ++LDQV LVAALSACAE+GDLK+G+WIHSYID   H  N+
Sbjct: 227 AQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQ 286

Query: 52  ERTVLLNNALLHMYAGC 2
              V LNN+L+HMYA C
Sbjct: 287 PLLVSLNNSLIHMYASC 303



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
 Frame = -1

Query: 346 NTLLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGCVHNGRCKEALSLLREMLQARME 167
           N+L+  Y  C  ID A +VF  M +R+ +SWT++++G    G  +EAL + + M +   +
Sbjct: 294 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTD 353

Query: 166 ---LDQVTLVAALSACAEIGDLKMGSWIHSYIDRSW 68
               D +T +  L AC+  G +  G      +++ W
Sbjct: 354 EGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKW 389


>emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
          Length = 569

 Score =  192 bits (488), Expect = 2e-47
 Identities = 85/137 (62%), Positives = 111/137 (81%)
 Frame = -1

Query: 412 YGGVKNAHKVFDGMTERSVVTWNTLLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGC 233
           Y GV+ A +VFD + +R++V+WN+LL+GYV+C D+DGARR+F EMPERN+VSWTT+++GC
Sbjct: 183 YDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGC 242

Query: 232 VHNGRCKEALSLLREMLQARMELDQVTLVAALSACAEIGDLKMGSWIHSYIDRSWHMKNK 53
              GRCK+AL L  EM +A ++LDQV LVAALSACAE+GDLK+G+WIHSYID   H  N+
Sbjct: 243 AQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQ 302

Query: 52  ERTVLLNNALLHMYAGC 2
              V LNN+L+HMYA C
Sbjct: 303 PLLVSLNNSLIHMYASC 319



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
 Frame = -1

Query: 346 NTLLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGCVHNGRCKEALSLLREMLQARME 167
           N+L+  Y  C  ID A +VF  M +R+ +SWT++++G    G  +EAL + + M +   +
Sbjct: 310 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTD 369

Query: 166 ---LDQVTLVAALSACAEIGDLKMGSWIHSYIDRSW 68
               D +T +  L AC+  G +  G      +++ W
Sbjct: 370 EGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKW 405


>ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 478

 Score =  178 bits (451), Expect = 5e-43
 Identities = 84/137 (61%), Positives = 109/137 (79%), Gaps = 1/137 (0%)
 Frame = -1

Query: 409 GGVKNAHKVFDGMTERSVVTWNTLLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGCV 230
           GGV+ A  VFDGM +RSVV+WN++L+GYV+C D DGARRVF  MP RN+VSWTT+V+GC 
Sbjct: 90  GGVERARHVFDGMPQRSVVSWNSMLAGYVRCADFDGARRVFDVMPCRNVVSWTTMVAGCA 149

Query: 229 HNGRCKEALSLLREMLQARMELDQVTLVAALSACAEIGDLKMGSWIHSYIDRSWHMKN-K 53
            NG+ ++AL L  EM +A +ELDQV LVAALSACAE+GDLK+G WIH Y+ + +  +N +
Sbjct: 150 RNGKSRQALLLFGEMRRACVELDQVALVAALSACAELGDLKLGRWIHWYVQQRFVARNWQ 209

Query: 52  ERTVLLNNALLHMYAGC 2
           + +V LNNAL+HMYA C
Sbjct: 210 QPSVRLNNALIHMYASC 226



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
 Frame = -1

Query: 346 NTLLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGCVHNGRCKEALSLLREMLQARME 167
           N L+  Y  C  +  A +VF +MP ++ VSWT+++      G  KEAL L + ML   ++
Sbjct: 217 NALIHMYASCGILHEAYQVFVKMPRKSTVSWTSMIMAFAKQGLGKEALDLFKTMLSDGVK 276

Query: 166 L-----DQVTLVAALSACAEIGDLKMGSWIHSYIDRSW 68
           +     D++T +  L AC+  G +  G  I + +  +W
Sbjct: 277 VDGVRPDEITFIGVLCACSHAGFVDEGHQIFASMKHTW 314


>ref|XP_002310922.1| predicted protein [Populus trichocarpa] gi|222850742|gb|EEE88289.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score =  174 bits (441), Expect = 7e-42
 Identities = 80/132 (60%), Positives = 107/132 (81%)
 Frame = -1

Query: 397 NAHKVFDGMTERSVVTWNTLLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGCVHNGR 218
           +A KVFD M+ER+VV WN++L+GY++  ++DGARR+F EMPERN+VSWTT++SG   NG+
Sbjct: 185 SARKVFDDMSERNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGK 244

Query: 217 CKEALSLLREMLQARMELDQVTLVAALSACAEIGDLKMGSWIHSYIDRSWHMKNKERTVL 38
           CK+AL+L  +M +A +ELDQV L+AAL+ACAE+GDLKMG WIHSYI  ++   N+   V 
Sbjct: 245 CKQALNLFDQMRKAGVELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVS 304

Query: 37  LNNALLHMYAGC 2
           LNNAL+HMYA C
Sbjct: 305 LNNALIHMYASC 316



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
 Frame = -1

Query: 382 FDGMTERSVVTWNT-LLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGCVHNGRCKEA 206
           F G  +R +V+ N  L+  Y  C  ID A  VF  MPER+ VSWT+L++     G  +  
Sbjct: 294 FVGSNQRVLVSLNNALIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAV 353

Query: 205 LSLLREMLQ---ARMELDQVTLVAALSACAEIGDLKMGSWIHSYIDRSWHMK 59
           L + R M +   +    D +T +  L AC+  G +  G  +   + + W +K
Sbjct: 354 LEIFRSMQRLGTSEARPDGITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIK 405


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