BLASTX nr result

ID: Atractylodes21_contig00022573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022573
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro...    90   2e-16
ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...    83   2e-14
ref|NP_174294.1| Intron maturase, type II-like protein [Arabidop...    81   1e-13
ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial pro...    74   2e-11

>ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 689

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 51/98 (52%), Positives = 59/98 (60%), Gaps = 6/98 (6%)
 Frame = -1

Query: 278 LRTKLKHL------TGISTIRTFSLFSAPXXXXXXXXXXXXXXXXXQDPYSLLKEDPVQV 117
           LRT +K L      T I+ IRT +  S                   QDPYSL+KEDP+QV
Sbjct: 3   LRTSIKRLPLQPLLTTITPIRTLTALST-----------HQEREQEQDPYSLMKEDPIQV 51

Query: 116 LSDLWVRTFSNKNQTHFSNLTGFLSKLDLWVLAYQRTC 3
            S LWVR+FSN+    FSNLTGFLSK DLWVLAYQR+C
Sbjct: 52  CSSLWVRSFSNQTHAPFSNLTGFLSKFDLWVLAYQRSC 89


>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
           gi|223541113|gb|EEF42669.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 681

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
 Frame = -1

Query: 278 LRTKLKHLTGIST----IRTFSLFSAPXXXXXXXXXXXXXXXXXQDPYSLLKEDPVQVLS 111
           +RT +KHL   S+    +R+FS  S P                  DPYSLLK+DP+++ +
Sbjct: 3   VRTLIKHLPSTSSFYKSLRSFS--SLPIHQ---------------DPYSLLKQDPIEICT 45

Query: 110 DLWVRTFSNKNQTHFSNLTGFLSKLDLWVLAYQRTC 3
            LWV++FS+   T F NLTGFLSKLDLWVLAYQR+C
Sbjct: 46  SLWVKSFSSPPNTTFPNLTGFLSKLDLWVLAYQRSC 81


>ref|NP_174294.1| Intron maturase, type II-like protein [Arabidopsis thaliana]
           gi|12324175|gb|AAG52062.1|AC022455_16 unknown protein;
           35070-37205 [Arabidopsis thaliana]
           gi|332193046|gb|AEE31167.1| Intron maturase, type
           II-like protein [Arabidopsis thaliana]
          Length = 711

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/51 (70%), Positives = 41/51 (80%)
 Frame = -1

Query: 155 DPYSLLKEDPVQVLSDLWVRTFSNKNQTHFSNLTGFLSKLDLWVLAYQRTC 3
           DPYSLLK+DPV +   LWV++FS+     FSNLTGFLSK DLWVLAYQRTC
Sbjct: 48  DPYSLLKQDPVDICLSLWVKSFSSPPSATFSNLTGFLSKFDLWVLAYQRTC 98


>ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|222848302|gb|EEE85849.1|
           predicted protein [Populus trichocarpa]
          Length = 623

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = -1

Query: 155 DPYSLLKEDPVQVLSDLWVRTFSNKNQTHFSNLTGFLSKLDLWVLAYQRTC 3
           DPYS+LKEDPV + + +WV++FS+ +   FSNLTGFLSKLDLW LAYQR+C
Sbjct: 1   DPYSVLKEDPVDICTSIWVKSFSSPSNFTFSNLTGFLSKLDLWALAYQRSC 51


>ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Glycine max]
          Length = 686

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/51 (60%), Positives = 42/51 (82%)
 Frame = -1

Query: 155 DPYSLLKEDPVQVLSDLWVRTFSNKNQTHFSNLTGFLSKLDLWVLAYQRTC 3
           DP+SL+K+DP+++ + LWV+TFS+   T F NLTGFLS  DLW+LAYQR+C
Sbjct: 37  DPHSLMKQDPIEICTSLWVKTFSSST-TSFPNLTGFLSNFDLWLLAYQRSC 86


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