BLASTX nr result

ID: Atractylodes21_contig00022535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022535
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163452.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    70   2e-10
ref|XP_003615335.1| E3 ubiquitin-protein ligase HUWE1 [Medicago ...    70   2e-10
ref|XP_003527888.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    69   4e-10
ref|XP_003518270.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-...    67   2e-09
ref|XP_002864007.1| predicted protein [Arabidopsis lyrata subsp....    63   3e-08

>ref|XP_004163452.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           UPL2-like [Cucumis sativus]
          Length = 3666

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = -3

Query: 115 GEGPIGPNVKLDSETPPKVKAFIDKVIQCPLQDIAIPL 2
           GEG  GP++KLDSE PPK+KAFIDKVIQCPL DIAIPL
Sbjct: 18  GEGSFGPSIKLDSEPPPKIKAFIDKVIQCPLHDIAIPL 55


>ref|XP_003615335.1| E3 ubiquitin-protein ligase HUWE1 [Medicago truncatula]
           gi|355516670|gb|AES98293.1| E3 ubiquitin-protein ligase
           HUWE1 [Medicago truncatula]
          Length = 3655

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -3

Query: 112 EGPIGPNVKLDSETPPKVKAFIDKVIQCPLQDIAIPL 2
           EG IGP++KLDSE PPKVKAFI+KVIQCPLQDIAIPL
Sbjct: 19  EGAIGPSIKLDSEPPPKVKAFIEKVIQCPLQDIAIPL 55


>ref|XP_003527888.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3654

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = -3

Query: 112 EGPIGPNVKLDSETPPKVKAFIDKVIQCPLQDIAIPL 2
           EG IGP+VKLDS+ PPK+KAFI+KVIQCPLQDIAIPL
Sbjct: 19  EGSIGPSVKLDSDPPPKIKAFIEKVIQCPLQDIAIPL 55


>ref|XP_003518270.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Glycine max]
          Length = 3659

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/36 (80%), Positives = 34/36 (94%)
 Frame = -3

Query: 109 GPIGPNVKLDSETPPKVKAFIDKVIQCPLQDIAIPL 2
           G IGP+VK+DSE PPK+KAFI+K+IQCPLQDIAIPL
Sbjct: 20  GAIGPSVKVDSEPPPKIKAFIEKIIQCPLQDIAIPL 55


>ref|XP_002864007.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309842|gb|EFH40266.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 3616

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = -3

Query: 115 GEGPIGPNVKLDSETPPKVKAFIDKVIQCPLQDIAIPL 2
           GEG IGP+++LD+E PP++K+FIDKVIQ PL DIAIPL
Sbjct: 19  GEGSIGPSIRLDAEPPPEIKSFIDKVIQSPLSDIAIPL 56


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