BLASTX nr result

ID: Atractylodes21_contig00022517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022517
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...    67   1e-09
ref|XP_003543085.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...    66   3e-09
ref|XP_003635315.1| PREDICTED: pre-mRNA-splicing factor syf1-lik...    64   1e-08
emb|CBI23476.3| unnamed protein product [Vitis vinifera]               64   1e-08

>ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|222847967|gb|EEE85514.1|
            predicted protein [Populus trichocarpa]
          Length = 908

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/51 (74%), Positives = 43/51 (84%)
 Frame = -3

Query: 355  KVEIAQKDVPEAVFGGLVRKRDEEAEKDNNESGDGGSRLGALERIKRMRQG 203
            KVEIAQKDVP AVFGGL  KR EE EKD  ++ DGGSRLGALERIKR+++G
Sbjct: 860  KVEIAQKDVPSAVFGGLAGKR-EEPEKD--DAKDGGSRLGALERIKRLKRG 907


>ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max]
          Length = 918

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
 Frame = -3

Query: 355  KVEIAQKDVPEAVFGGLVRKRDE---EAEKDNNESGDGGSRLGALERIKRMRQ 206
            K+EIAQKDVP AVFGGL+RKRDE     E D  +  D  +RLGALERIKR+RQ
Sbjct: 865  KIEIAQKDVPSAVFGGLIRKRDENENNGEVDVTKDKDNENRLGALERIKRLRQ 917


>ref|XP_003543085.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max]
          Length = 919

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/53 (64%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
 Frame = -3

Query: 355  KVEIAQKDVPEAVFGGLVRKRDE---EAEKDNNESGDGGSRLGALERIKRMRQ 206
            K+EIAQKDVP AVFGGL+RKRDE     E D  +  D G RLGALER+KR++Q
Sbjct: 866  KIEIAQKDVPSAVFGGLIRKRDENENNGEVDAAKDKDNGIRLGALERMKRLKQ 918


>ref|XP_003635315.1| PREDICTED: pre-mRNA-splicing factor syf1-like [Vitis vinifera]
          Length = 816

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 7/57 (12%)
 Frame = -3

Query: 355 KVEIAQKDVPEAVFGGLVRKRDE-EAEKDNNESG------DGGSRLGALERIKRMRQ 206
           KVEIAQKD+P AVFGGLVRKR+E + + D +E G      D  S+LGALERIKR RQ
Sbjct: 759 KVEIAQKDIPNAVFGGLVRKREEADGDGDGDEDGAASKDKDRDSQLGALERIKRQRQ 815


>emb|CBI23476.3| unnamed protein product [Vitis vinifera]
          Length = 914

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 7/57 (12%)
 Frame = -3

Query: 355  KVEIAQKDVPEAVFGGLVRKRDE-EAEKDNNESG------DGGSRLGALERIKRMRQ 206
            KVEIAQKD+P AVFGGLVRKR+E + + D +E G      D  S+LGALERIKR RQ
Sbjct: 857  KVEIAQKDIPNAVFGGLVRKREEADGDGDGDEDGAASKDKDRDSQLGALERIKRQRQ 913


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