BLASTX nr result

ID: Atractylodes21_contig00022494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022494
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprot...   323   3e-86
ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein...   311   1e-82
ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|1...   309   4e-82
gb|ABK93026.1| unknown [Populus trichocarpa]                          308   1e-81
ref|XP_002331278.1| predicted protein [Populus trichocarpa] gi|2...   306   3e-81

>ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Vitis
           vinifera] gi|298204446|emb|CBI16926.3| unnamed protein
           product [Vitis vinifera]
          Length = 182

 Score =  323 bits (828), Expect = 3e-86
 Identities = 153/169 (90%), Positives = 165/169 (97%)
 Frame = -1

Query: 819 KKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSSLCRMTQKLVNILKQMDPRDPYRIE 640
           KKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYS LCRM QKLVNILKQMDPRDP+RIE
Sbjct: 13  KKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSGLCRMVQKLVNILKQMDPRDPFRIE 72

Query: 639 MTDALLEKLYNMGVIPSQKSLALCDRLSVSSFCRRRLATLLVRLKFAEHLKEAVTYIEQG 460
           MTD LLEKLYN+GVIP++KSLALCDRL+VSSFCRRRL+T+LVRLKFAEHLKEAVTYIEQG
Sbjct: 73  MTDMLLEKLYNIGVIPTRKSLALCDRLAVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQG 132

Query: 459 HIRVGPDTVTDPAFLVTRNMEDFVTWVDTSKIKRKVMVYNDKLDDYDAM 313
           HIRVGPDTVTDPAFLVTRN+EDFVTWVD+SKIKRKV+ YN++LDDYDAM
Sbjct: 133 HIRVGPDTVTDPAFLVTRNLEDFVTWVDSSKIKRKVLQYNERLDDYDAM 181


>ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis] gi|223534772|gb|EEF36463.1| U3 small
           nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis]
          Length = 182

 Score =  311 bits (796), Expect = 1e-82
 Identities = 148/169 (87%), Positives = 159/169 (94%)
 Frame = -1

Query: 819 KKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSSLCRMTQKLVNILKQMDPRDPYRIE 640
           KKVNFL WKREG HREA VM RYH+  RDDYKKYS +CRM QKLVNILKQMDPRDPYR+E
Sbjct: 13  KKVNFLLWKREGDHREAKVMQRYHIVDRDDYKKYSGICRMVQKLVNILKQMDPRDPYRVE 72

Query: 639 MTDALLEKLYNMGVIPSQKSLALCDRLSVSSFCRRRLATLLVRLKFAEHLKEAVTYIEQG 460
           MTD LLEKLYNMGVIPS+KSLALCDRLSVSSFCRRRL+T+L+RLKFAEHLKEA+TYIEQG
Sbjct: 73  MTDILLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAITYIEQG 132

Query: 459 HIRVGPDTVTDPAFLVTRNMEDFVTWVDTSKIKRKVMVYNDKLDDYDAM 313
           HIRVGP+TVTDPAFLVTRNMEDFVTWVDTSKIKRKV+ YN+KLDDYDAM
Sbjct: 133 HIRVGPETVTDPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEKLDDYDAM 181


>ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|118485533|gb|ABK94619.1|
           unknown [Populus trichocarpa]
           gi|222873150|gb|EEF10281.1| predicted protein [Populus
           trichocarpa]
          Length = 182

 Score =  309 bits (792), Expect = 4e-82
 Identities = 146/169 (86%), Positives = 159/169 (94%)
 Frame = -1

Query: 819 KKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSSLCRMTQKLVNILKQMDPRDPYRIE 640
           KKVNFL+WKRE  HREAHVM RYH+  RDDYKKYSS+CRM QKL NILKQMDPRDP+R+E
Sbjct: 13  KKVNFLDWKRENNHREAHVMQRYHIVERDDYKKYSSVCRMVQKLTNILKQMDPRDPFRVE 72

Query: 639 MTDALLEKLYNMGVIPSQKSLALCDRLSVSSFCRRRLATLLVRLKFAEHLKEAVTYIEQG 460
           MTD LLEKLYNMGVIPS+KSLALCDRLSVSSFCRRRL+T+L+RLKFAEHLKEAVTYIEQG
Sbjct: 73  MTDVLLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAVTYIEQG 132

Query: 459 HIRVGPDTVTDPAFLVTRNMEDFVTWVDTSKIKRKVMVYNDKLDDYDAM 313
           HIRVGP+TVTDPAFLVTRN EDFVTWVDTSKIKRKV+ YN+K+DDYDAM
Sbjct: 133 HIRVGPETVTDPAFLVTRNTEDFVTWVDTSKIKRKVLEYNEKVDDYDAM 181


>gb|ABK93026.1| unknown [Populus trichocarpa]
          Length = 182

 Score =  308 bits (788), Expect = 1e-81
 Identities = 145/169 (85%), Positives = 158/169 (93%)
 Frame = -1

Query: 819 KKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSSLCRMTQKLVNILKQMDPRDPYRIE 640
           KKVNFL+WKRE  HREAHVM RYH+  RDDYKKYSS+CRM QKL NILKQMDPRDPYR+E
Sbjct: 13  KKVNFLDWKREQNHREAHVMQRYHIVERDDYKKYSSVCRMVQKLTNILKQMDPRDPYRVE 72

Query: 639 MTDALLEKLYNMGVIPSQKSLALCDRLSVSSFCRRRLATLLVRLKFAEHLKEAVTYIEQG 460
           MTD LLEKLYNMGVIPS+KSLALCDRLSVSSFCRRRL+T+L+RLKFAEHLKEA+TYIEQG
Sbjct: 73  MTDVLLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAITYIEQG 132

Query: 459 HIRVGPDTVTDPAFLVTRNMEDFVTWVDTSKIKRKVMVYNDKLDDYDAM 313
           HIR GP+TVTDPAFLVTR+MEDFVTWVDTSKIKRKV+ YN+ LDDYDAM
Sbjct: 133 HIRAGPETVTDPAFLVTRSMEDFVTWVDTSKIKRKVLEYNENLDDYDAM 181


>ref|XP_002331278.1| predicted protein [Populus trichocarpa] gi|222873703|gb|EEF10834.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  306 bits (785), Expect = 3e-81
 Identities = 144/169 (85%), Positives = 158/169 (93%)
 Frame = -1

Query: 819 KKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSSLCRMTQKLVNILKQMDPRDPYRIE 640
           KKVNFL+WKRE  HREAHVM RYH+  RDDYKKYSS+CRM QKL NILKQMDPRDPYR+E
Sbjct: 13  KKVNFLDWKREQNHREAHVMQRYHIVERDDYKKYSSVCRMVQKLTNILKQMDPRDPYRVE 72

Query: 639 MTDALLEKLYNMGVIPSQKSLALCDRLSVSSFCRRRLATLLVRLKFAEHLKEAVTYIEQG 460
           MTD LLEKLYNMGVIPS+KSLALCDRLSVSSFCRRRL+T+L+RLKF+EHLKEA+TYIEQG
Sbjct: 73  MTDVLLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFSEHLKEAITYIEQG 132

Query: 459 HIRVGPDTVTDPAFLVTRNMEDFVTWVDTSKIKRKVMVYNDKLDDYDAM 313
           HIR GP+TVTDPAFLVTR+MEDFVTWVDTSKIKRKV+ YN+ LDDYDAM
Sbjct: 133 HIRAGPETVTDPAFLVTRSMEDFVTWVDTSKIKRKVLEYNENLDDYDAM 181


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