BLASTX nr result

ID: Atractylodes21_contig00022354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022354
         (1294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...   479   e-133
emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]   473   e-131
ref|XP_002319214.1| predicted protein [Populus trichocarpa] gi|2...   457   e-126
ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus co...   452   e-125
emb|CBI26575.3| unnamed protein product [Vitis vinifera]              451   e-124

>ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 834

 Score =  479 bits (1232), Expect = e-133
 Identities = 252/424 (59%), Positives = 312/424 (73%), Gaps = 28/424 (6%)
 Frame = -1

Query: 1192 MGVPGLYRWLVDRYPHTLCSVAEDASPFTKGPRM--DTTKPNPNGVEFDNLYIDMNGVIH 1019
            MG+P  YRWL DRYP  + +  ED      G  +  DTT+PNPNG EFDNLY+DMNG+IH
Sbjct: 1    MGIPAFYRWLADRYPLAVVNAVEDRPAVVNGVSVAVDTTRPNPNGNEFDNLYLDMNGIIH 60

Query: 1018 PCFHPEGGLPAPQSYDDVFKSIFRYIERVFSIVRPRKLLFLAVDGVAPRAKMNHQRIRRF 839
            PCFHPEG LPAP++Y DVFK++F+YI+R+FS+VRPRKLL++A+DGVAPRAKMN QR RRF
Sbjct: 61   PCFHPEG-LPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRF 119

Query: 838  RNARESAGEVPAVE---------------VEGDKKLDPNVITPGTEFMALLSSALKYYVH 704
            R A+E+A +    E               ++  KKLD NVITPGTEFMALLSSALKYY+H
Sbjct: 120  RAAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYYIH 179

Query: 703  GRMNVDPAWRRIKVILSDSSVVGEGEDKIMSYIRCQRNLPGYDPNTRHCLHGLDADLIML 524
             RMN+DP WR IKVILSD++V GEGE KIMSYIR QRNLPG+DPNTRHCL+GLDADLIML
Sbjct: 180  LRMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239

Query: 523  ALATHEIHVSILREVIING--QIGIGRYLKNSLAGNKK------QFYPVTMRRFLHDLNF 368
            ALATHEIH SILRE +     +    +  K+SL  NK+      +     +  F+    F
Sbjct: 240  ALATHEIHFSILREDVHKAYRKDKNNKPRKDSLLVNKRGKSKQGEVGGEDIEDFISRQKF 299

Query: 367  EFFNIWVLREYLEREL-LPNVE-GTDFERLIDDFVFMCLFVGNDFLPRLPSLDISEGAIE 194
            +F NIW LR+YL  ++ +P+    TD ERLIDDFVFMCLFVGNDFLP +PSL+ISEGAI+
Sbjct: 300  QFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGAID 359

Query: 193  LLLIIYQEEFVKM-GYLTNSSEVNLKSMEHFLQALSSHENAIFMKRCQVLTEKTKKKRKR 17
            LL+ +Y++EFV++ GYLTNSSEV L+ +E F+Q + SHENAIF KR QV  +K +  R +
Sbjct: 360  LLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQV--QKKRGVRFQ 417

Query: 16   GSQD 5
            GS +
Sbjct: 418  GSSN 421


>emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]
          Length = 1102

 Score =  473 bits (1216), Expect = e-131
 Identities = 252/430 (58%), Positives = 312/430 (72%), Gaps = 28/430 (6%)
 Frame = -1

Query: 1210 SVKPSKMGVPGLYRWLVDRYPHTLCSVAEDASPFTKGPRM--DTTKPNPNGVEFDNLYID 1037
            SVK   +     YRWL DRYP  + +  ED      G  +  DTT+PNPNG EFDNLY+D
Sbjct: 126  SVKEVLLSWRAFYRWLADRYPLAVVNAVEDRPAVVNGVSVAVDTTRPNPNGNEFDNLYLD 185

Query: 1036 MNGVIHPCFHPEGGLPAPQSYDDVFKSIFRYIERVFSIVRPRKLLFLAVDGVAPRAKMNH 857
            MNG+IHPCFHPEG LPAP++Y DVFK++F+YI+R+FS+VRPRKLL++A+DGVAPRAKMN 
Sbjct: 186  MNGIIHPCFHPEG-LPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQ 244

Query: 856  QRIRRFRNARESAGEVPAVE---------------VEGDKKLDPNVITPGTEFMALLSSA 722
            QR RRFR A+E+A +    E               ++  KKLD NVITPGTEFMALLSSA
Sbjct: 245  QRARRFRAAKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSA 304

Query: 721  LKYYVHGRMNVDPAWRRIKVILSDSSVVGEGEDKIMSYIRCQRNLPGYDPNTRHCLHGLD 542
            LKYY+H RMN+DP WR IKVILSD++V GEGE KIMSYIR QRNLPG+DPNTRHCL+GLD
Sbjct: 305  LKYYIHLRMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLD 364

Query: 541  ADLIMLALATHEIHVSILREVIING--QIGIGRYLKNSLAGNKK------QFYPVTMRRF 386
            ADLIMLALATHEIH SILRE +     +    +  K+SL  NK+      +     +  F
Sbjct: 365  ADLIMLALATHEIHFSILREDVHKAYRKDKNNKPRKDSLLVNKRGXSKQGEVGGEDIEDF 424

Query: 385  LHDLNFEFFNIWVLREYLEREL-LPNVE-GTDFERLIDDFVFMCLFVGNDFLPRLPSLDI 212
            +    F+F NIW LR+YL  ++ +P+    TD ERLIDDFVFMCLFVGNDFLP +PSL+I
Sbjct: 425  ISRQKFQFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEI 484

Query: 211  SEGAIELLLIIYQEEFVKM-GYLTNSSEVNLKSMEHFLQALSSHENAIFMKRCQVLTEKT 35
            SEGAI+LL+ +Y++EFV++ GYLTNSSEV L+ +E F+Q + SHENAIF KR QV  +K 
Sbjct: 485  SEGAIDLLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQV--QKK 542

Query: 34   KKKRKRGSQD 5
            +  R +GS +
Sbjct: 543  RGVRFQGSSN 552


>ref|XP_002319214.1| predicted protein [Populus trichocarpa] gi|222857590|gb|EEE95137.1|
            predicted protein [Populus trichocarpa]
          Length = 692

 Score =  457 bits (1176), Expect = e-126
 Identities = 234/401 (58%), Positives = 292/401 (72%), Gaps = 20/401 (4%)
 Frame = -1

Query: 1192 MGVPGLYRWLVDRYPHTLCSVAEDASPFTKGPR--MDTTKPNPNGVEFDNLYIDMNGVIH 1019
            MG+P  YRWL ++YP     V E+      G    +DT+ PNPNG+EFDNLY+DMNG+IH
Sbjct: 1    MGIPAFYRWLTEKYPLITADVMEETPLLINGVSVPLDTSCPNPNGIEFDNLYLDMNGIIH 60

Query: 1018 PCFHPEGGLPAPQSYDDVFKSIFRYIERVFSIVRPRKLLFLAVDGVAPRAKMNHQRIRRF 839
            PCFHPEG LP P +Y++VF ++F+YI+R+FSI+RPRKLLF+A+DGVAPRAKMN QR RRF
Sbjct: 61   PCFHPEG-LPPPTTYEEVFAAVFKYIDRIFSIIRPRKLLFMAIDGVAPRAKMNQQRSRRF 119

Query: 838  RNARESAGEVPAVEVEGD-------------KKLDPNVITPGTEFMALLSSALKYYVHGR 698
            R AR++A +  ++E +G              KKLD NVITPGTEFM LLSSAL YY+  R
Sbjct: 120  RAARDAADQALSIETDGGIVPESEEGNLEQVKKLDSNVITPGTEFMDLLSSALHYYIRLR 179

Query: 697  MNVDPAWRRIKVILSDSSVVGEGEDKIMSYIRCQRNLPGYDPNTRHCLHGLDADLIMLAL 518
            M  D  WR IKVILSD++V GEGE KIMSYIR QRNLPG+DPNTRHCL+GLDADLIMLAL
Sbjct: 180  MKEDLGWRGIKVILSDANVAGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLAL 239

Query: 517  ATHEIHVSILREVIINGQIGIGRYLKNSLAGNKKQF--YPVTMRRFLHDLNFEFFNIWVL 344
            A+HEIH SILRE             +  L G+  Q   +   +   +  + F+F N+W+L
Sbjct: 240  ASHEIHFSILRE-------------RRKLNGDSDQVGKFAENIENHISGMKFQFLNVWIL 286

Query: 343  REYLEREL-LPNVE-GTDFERLIDDFVFMCLFVGNDFLPRLPSLDISEGAIELLLIIYQE 170
            REYL  +L +P+     D ER+IDDFVFMCLFVGNDFLP +PSL+ISEGAI+LL+ +Y++
Sbjct: 287  REYLAYDLRIPDTTLKVDLERVIDDFVFMCLFVGNDFLPHIPSLEISEGAIDLLMTVYKK 346

Query: 169  EFVKM-GYLTNSSEVNLKSMEHFLQALSSHENAIFMKRCQV 50
            EF +M GYLTNS E+NL  +EHF+QAL SHE+AIF +R QV
Sbjct: 347  EFAQMGGYLTNSFEINLIRVEHFVQALGSHESAIFRRRNQV 387


>ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223540756|gb|EEF42316.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 1545

 Score =  452 bits (1163), Expect = e-125
 Identities = 236/421 (56%), Positives = 307/421 (72%), Gaps = 26/421 (6%)
 Frame = -1

Query: 1192 MGVPGLYRWLVDRYPHTLCSVAEDASPFTKGPRM--DTTKPNPNGVEFDNLYIDMNGVIH 1019
            MG+P  Y+WL ++YP T+  V E       G  +  +T  PNPNG+EFDNLY+DMNG+IH
Sbjct: 1    MGIPSFYKWLTEKYPDTVVDVIEARRRMGNGVLLPINTALPNPNGIEFDNLYLDMNGIIH 60

Query: 1018 PCFHPEGGLPAPQSYDDVFKSIFRYIERVFSIVRPRKLLFLAVDGVAPRAKMNHQRIRRF 839
            PCFHP   LP P++Y++VF+++F YI+++FS+VRPRKLLFL +DGVAPRAKMN QR RRF
Sbjct: 61   PCFHPSD-LPPPKTYEEVFRNVFMYIDKIFSMVRPRKLLFLGIDGVAPRAKMNQQRSRRF 119

Query: 838  RNARESAGEV----PAVEVEGDKK--------LDPNVITPGTEFMALLSSALKYYVHGRM 695
            R A+E+  E       +E+EG+          LD NVITPGTEFM LLSSAL+YY+  R+
Sbjct: 120  RAAKEAEKEALKMKQFIELEGENSTSLKEPAVLDSNVITPGTEFMDLLSSALRYYIRLRV 179

Query: 694  NVDPAWRRIKVILSDSSVVGEGEDKIMSYIRCQRNLPGYDPNTRHCLHGLDADLIMLALA 515
            N D  WR IKVILSDS+V GEGE KIMSYIR QR+LPGYDPNTRHCL+GLDADLIMLALA
Sbjct: 180  NRDSGWRGIKVILSDSNVPGEGEHKIMSYIRLQRDLPGYDPNTRHCLYGLDADLIMLALA 239

Query: 514  THEIHVSILREVIINGQIGIGRYLKNSLAGN--------KKQFYPV-TMRRFLHDLNFEF 362
            THE+H +ILREV    +    R  K+    N        KK++ PV T+  ++  LNF+F
Sbjct: 240  THEVHFTILREVCAQ-KHSSKRGKKHKFVWNPQKKANSKKKKWMPVKTLEEYVSRLNFKF 298

Query: 361  FNIWVLREYLEREL-LPNVE-GTDFERLIDDFVFMCLFVGNDFLPRLPSLDISEGAIELL 188
              IW LRE+LE ++ +PN+   TD ERLIDDF+FMCLFVGNDFLP +P+L+IS+GAI+LL
Sbjct: 299  LYIWALREHLEYDMRIPNLALQTDLERLIDDFIFMCLFVGNDFLPHIPTLEISQGAIDLL 358

Query: 187  LIIYQEEFVKM-GYLTNSSEVNLKSMEHFLQALSSHENAIFMKRCQVLTEKTKKKRKRGS 11
            + +Y++EF +M GYLTNS E++L  +EHF+QA+  H++AIF +  Q L EK+ +K +R S
Sbjct: 359  MKVYRKEFRRMGGYLTNSFELDLTRVEHFIQAVGLHDDAIFRQHIQKLKEKSARKEERSS 418

Query: 10   Q 8
            +
Sbjct: 419  K 419


>emb|CBI26575.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score =  451 bits (1161), Expect = e-124
 Identities = 242/422 (57%), Positives = 300/422 (71%), Gaps = 26/422 (6%)
 Frame = -1

Query: 1192 MGVPGLYRWLVDRYPHTLCSVAEDASPFTKGPRMDTTKPNPNGVEFDNLYIDMNGVIHPC 1013
            MG+P  YRWL DRYP  + +  ED                     FDNLY+DMNG+IHPC
Sbjct: 1    MGIPAFYRWLADRYPLAVVNAVEDRPAV-----------------FDNLYLDMNGIIHPC 43

Query: 1012 FHPEGGLPAPQSYDDVFKSIFRYIERVFSIVRPRKLLFLAVDGVAPRAKMNHQRIRRFRN 833
            FHPEG LPAP++Y DVFK++F+YI+R+FS+VRPRKLL++A+DGVAPRAKMN QR RRFR 
Sbjct: 44   FHPEG-LPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFRA 102

Query: 832  ARESAGEVPAVE---------------VEGDKKLDPNVITPGTEFMALLSSALKYYVHGR 698
            A+E+A +    E               ++  KKLD NVITPGTEFMALLSSALKYY+H R
Sbjct: 103  AKEAADDASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYYIHLR 162

Query: 697  MNVDPAWRRIKVILSDSSVVGEGEDKIMSYIRCQRNLPGYDPNTRHCLHGLDADLIMLAL 518
            MN+DP WR IKVILSD++V GEGE KIMSYIR QRNLPG+DPNTRHCL+GLDADLIMLAL
Sbjct: 163  MNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLAL 222

Query: 517  ATHEIHVSILREVIING--QIGIGRYLKNSLAGNKK------QFYPVTMRRFLHDLNFEF 362
            ATHEIH SILRE +     +    +  K+SL  NK+      +     +  F+    F+F
Sbjct: 223  ATHEIHFSILREDVHKAYRKDKNNKPRKDSLLVNKRGKSKQGEVGGEDIEDFISRQKFQF 282

Query: 361  FNIWVLREYLEREL-LPNVE-GTDFERLIDDFVFMCLFVGNDFLPRLPSLDISEGAIELL 188
             NIW LR+YL  ++ +P+    TD ERLIDDFVFMCLFVGNDFLP +PSL+ISEGAI+LL
Sbjct: 283  LNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGAIDLL 342

Query: 187  LIIYQEEFVKM-GYLTNSSEVNLKSMEHFLQALSSHENAIFMKRCQVLTEKTKKKRKRGS 11
            + +Y++EFV++ GYLTNSSEV L+ +E F+Q + SHENAIF KR QV  +K +  R +GS
Sbjct: 343  MTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQV--QKKRGVRFQGS 400

Query: 10   QD 5
             +
Sbjct: 401  SN 402


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