BLASTX nr result

ID: Atractylodes21_contig00022352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022352
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding prote...   195   1e-47
ref|XP_002324286.1| predicted protein [Populus trichocarpa] gi|2...   192   7e-47
ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding prote...   191   1e-46
ref|XP_004138734.1| PREDICTED: uncharacterized RNA-binding prote...   190   3e-46
ref|XP_002517589.1| protein with unknown function [Ricinus commu...   190   3e-46

>ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|296082008|emb|CBI21013.3| unnamed protein
           product [Vitis vinifera]
          Length = 158

 Score =  195 bits (495), Expect = 1e-47
 Identities = 95/156 (60%), Positives = 103/156 (66%), Gaps = 3/156 (1%)
 Frame = -3

Query: 767 PGDWNCRSCQHLNFQRRDSCQRCGEPRHXXXXXXXXXXGSINPSAFGFTAGPDVRPGDWY 588
           PGDWNCRSCQ+LNFQRRDSCQRCGEPR            S   S+FGFT GPDVRPGDWY
Sbjct: 4   PGDWNCRSCQYLNFQRRDSCQRCGEPR--PGDRGDYGGFSRGSSSFGFT-GPDVRPGDWY 60

Query: 587 CNVGNCGAHNFASRSSCFKCGAFKDDLA---XXXXXXXXXXXXXXXXXXXXXXXXXXXXX 417
           C +GNCGAHNFASRSSCFKCG  KD+ +                                
Sbjct: 61  CTIGNCGAHNFASRSSCFKCGGLKDESSGGYEGDMSRPRGFGFGSGGSSGSGIGRSGWKS 120

Query: 416 GDWICSRPGCNEHNFASRMECFRCNAPRESGSKSSY 309
           GDWIC+R GCNEHNFASRMECFRCNAPR+SG+KSSY
Sbjct: 121 GDWICNRSGCNEHNFASRMECFRCNAPRDSGNKSSY 156


>ref|XP_002324286.1| predicted protein [Populus trichocarpa] gi|222865720|gb|EEF02851.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score =  192 bits (488), Expect = 7e-47
 Identities = 96/154 (62%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
 Frame = -3

Query: 767 PGDWNCRSCQHLNFQRRDSCQRCGEPRHXXXXXXXXXXGSINPSAFGFTAGPDVRPGDWY 588
           PGDWNCRSCQHLNFQRRDSCQRCG+PR           G    S FGFT GPDVRPGDWY
Sbjct: 4   PGDWNCRSCQHLNFQRRDSCQRCGDPRPGERDHYGSFGGRSGGS-FGFT-GPDVRPGDWY 61

Query: 587 CNVGNCGAHNFASRSSCFKCGAFKDDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDW 408
           C+VGNCGAHNFASRSSCFKCG  KD+ +                             GDW
Sbjct: 62  CSVGNCGAHNFASRSSCFKCGMSKDESSGGGLDADISWMRGYGFGGGSASSRSNWKSGDW 121

Query: 407 ICSRPGCNEHNFASRMECFRCNAPRESGS-KSSY 309
           IC+R GCNEHNFASR EC+RCNAPRESGS KSSY
Sbjct: 122 ICTRSGCNEHNFASRTECYRCNAPRESGSNKSSY 155


>ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|297743402|emb|CBI36269.3| unnamed protein
           product [Vitis vinifera]
          Length = 150

 Score =  191 bits (485), Expect = 1e-46
 Identities = 92/153 (60%), Positives = 101/153 (66%)
 Frame = -3

Query: 767 PGDWNCRSCQHLNFQRRDSCQRCGEPRHXXXXXXXXXXGSINPSAFGFTAGPDVRPGDWY 588
           PGDWNCRSCQH+NFQRRDSCQRCG+P+                S+FGFT G DVRPGDWY
Sbjct: 4   PGDWNCRSCQHMNFQRRDSCQRCGDPKSGGGDFGSFGGRG--GSSFGFT-GSDVRPGDWY 60

Query: 587 CNVGNCGAHNFASRSSCFKCGAFKDDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDW 408
           CN GNCGAHNFASRS+CFKCGAFKD+ A                             GDW
Sbjct: 61  CNAGNCGAHNFASRSNCFKCGAFKDESA---GGYDSDMSRSRGFGFGGGSGRSGWKSGDW 117

Query: 407 ICSRPGCNEHNFASRMECFRCNAPRESGSKSSY 309
           ICSR GCNEHNFASRMECFRCNAPR+  +K+SY
Sbjct: 118 ICSRSGCNEHNFASRMECFRCNAPRDLSNKTSY 150


>ref|XP_004138734.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like
           [Cucumis sativus] gi|449525766|ref|XP_004169887.1|
           PREDICTED: uncharacterized RNA-binding protein
           C17H9.04c-like [Cucumis sativus]
          Length = 155

 Score =  190 bits (482), Expect = 3e-46
 Identities = 90/153 (58%), Positives = 96/153 (62%)
 Frame = -3

Query: 767 PGDWNCRSCQHLNFQRRDSCQRCGEPRHXXXXXXXXXXGSINPSAFGFTAGPDVRPGDWY 588
           PGDWNCRSC HLNFQRRDSCQRCG+PR                S+FGFT GPDVRPGDWY
Sbjct: 4   PGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPGDWY 63

Query: 587 CNVGNCGAHNFASRSSCFKCGAFKDDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDW 408
           C V NCGAHNFASRS CFKCGA KD+ +                             GDW
Sbjct: 64  CTVANCGAHNFASRSICFKCGATKDETS--AAAYDGDLPRMRGFNFGGASNRPGWKSGDW 121

Query: 407 ICSRPGCNEHNFASRMECFRCNAPRESGSKSSY 309
           IC+R  CNEHNFASR ECFRCNAPR+S SKS Y
Sbjct: 122 ICARSDCNEHNFASRRECFRCNAPRDSNSKSPY 154


>ref|XP_002517589.1| protein with unknown function [Ricinus communis]
           gi|223543221|gb|EEF44753.1| protein with unknown
           function [Ricinus communis]
          Length = 152

 Score =  190 bits (482), Expect = 3e-46
 Identities = 89/153 (58%), Positives = 100/153 (65%)
 Frame = -3

Query: 767 PGDWNCRSCQHLNFQRRDSCQRCGEPRHXXXXXXXXXXGSINPSAFGFTAGPDVRPGDWY 588
           PGDWNCRSCQHLNFQRRDSCQRCG+ R            S+  S+FGF+ G DVRPGDWY
Sbjct: 4   PGDWNCRSCQHLNFQRRDSCQRCGDSRSGGGDFGGFGGRSVG-SSFGFSTGSDVRPGDWY 62

Query: 587 CNVGNCGAHNFASRSSCFKCGAFKDDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDW 408
           C  GNCGAHNFASRSSCFKCG +KDD A                             GDW
Sbjct: 63  CTAGNCGAHNFASRSSCFKCGVYKDDSA---AATGFDSDIPRSRGFGGGSNRSGWKSGDW 119

Query: 407 ICSRPGCNEHNFASRMECFRCNAPRESGSKSSY 309
           IC+R GCNEHNFASRMECF+CNAPRE  ++++Y
Sbjct: 120 ICTRWGCNEHNFASRMECFKCNAPRELSNRTTY 152


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