BLASTX nr result

ID: Atractylodes21_contig00022342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022342
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU04617.1| CENP-C [Medicago truncatula]                            57   1e-06
ref|XP_003619785.1| CENP-C [Medicago truncatula] gi|355494800|gb...    57   2e-06
ref|XP_002303277.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06
dbj|BAD61293.1| CENPCA protein-like [Oryza sativa Japonica Group]      55   6e-06
gb|EEC71093.1| hypothetical protein OsI_02875 [Oryza sativa Indi...    55   6e-06

>gb|AAU04617.1| CENP-C [Medicago truncatula]
          Length = 697

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
 Frame = +2

Query: 17  PSTNKRKNKMRTRQVDQRKRRENP----TEADTSWKSGIXXXXXXXXXPLEYWKGERLLY 184
           P   +++ K+  ++V + K+RE       +A TSW+SG+         PLEYWKGER++Y
Sbjct: 592 PVNGQKRVKVCAQKVSKGKKREQHRMSLADAGTSWESGVRRSKRFRTRPLEYWKGERMVY 651

Query: 185 GRVHNS 202
           GRVH S
Sbjct: 652 GRVHES 657


>ref|XP_003619785.1| CENP-C [Medicago truncatula] gi|355494800|gb|AES76003.1| CENP-C
           [Medicago truncatula]
          Length = 641

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/56 (46%), Positives = 35/56 (62%)
 Frame = +2

Query: 35  KNKMRTRQVDQRKRRENPTEADTSWKSGIXXXXXXXXXPLEYWKGERLLYGRVHNS 202
           K+ MR     +R  R++  +A TSW+SG+         PLEYWKGER++YGRVH S
Sbjct: 546 KSCMRKGSKGKRLLRKSLADAGTSWESGVRRSTRFRTKPLEYWKGERMVYGRVHES 601


>ref|XP_002303277.1| predicted protein [Populus trichocarpa] gi|222840709|gb|EEE78256.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
 Frame = +2

Query: 2   EEHPRPSTNKR-KNKMRT---RQVDQRKRRENPTEADTSWKSGIXXXXXXXXXPLEYWKG 169
           EE P  S NK+ K K  T   R+     +R +   + TSW++G+         PLEYWKG
Sbjct: 70  EEPPVVSLNKQAKAKSHTAKGRKNGSLSKRHSLAASGTSWETGLRRSTRIRSRPLEYWKG 129

Query: 170 ERLLYGRVHNSKY 208
           ER LYGR+H S++
Sbjct: 130 ERFLYGRIHGSEF 142


>dbj|BAD61293.1| CENPCA protein-like [Oryza sativa Japonica Group]
          Length = 618

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
 Frame = +2

Query: 5   EHPRPSTNKRKNKMRTRQVDQR-KRRENPTEADTSWKSGIXXXXXXXXXPLEYWKGERLL 181
           + P PS    KN++R R   Q   RR++  +A  +W++G+         PL++W GER +
Sbjct: 512 QSPSPSNGTSKNEVRKRNKKQDLNRRKSLADAGLTWQAGVRRSTRIRSKPLQHWLGERFI 571

Query: 182 YGRVHNS-------KYFFAMISLLDALKKCSFIPQNKSHVLILDIKH 301
           YGR+H +       K F         L+  SF+P+  S +L    K+
Sbjct: 572 YGRIHGTMATVIGVKSFSPSQEGKGPLRVKSFVPEQFSDLLAESAKY 618


>gb|EEC71093.1| hypothetical protein OsI_02875 [Oryza sativa Indica Group]
          Length = 837

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
 Frame = +2

Query: 5    EHPRPSTNKRKNKMRTRQVDQR-KRRENPTEADTSWKSGIXXXXXXXXXPLEYWKGERLL 181
            + P PS    KN++R R   Q   RR++  +A  +W++G+         PL++W GER +
Sbjct: 731  QSPSPSNGTSKNEVRKRNKKQDLNRRKSLADAGLTWQAGVRRSTRIRSKPLQHWLGERFI 790

Query: 182  YGRVHNS-------KYFFAMISLLDALKKCSFIPQNKSHVLILDIKH 301
            YGR+H +       K F         L+  SF+P+  S +L    K+
Sbjct: 791  YGRIHGTMATVIGVKSFSPSQEGKGPLRVKSFVPEQFSDLLAESAKY 837


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