BLASTX nr result

ID: Atractylodes21_contig00022225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022225
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316060.1| predicted protein [Populus trichocarpa] gi|2...   114   9e-24
ref|XP_002311369.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
gb|ACQ42220.1| R2R3 transcription factor MYB108-like protein 1 [...    95   6e-18
ref|XP_002280500.1| PREDICTED: uncharacterized protein LOC100248...    95   7e-18
emb|CAN63179.1| hypothetical protein VITISV_029107 [Vitis vinifera]    95   7e-18

>ref|XP_002316060.1| predicted protein [Populus trichocarpa] gi|222865100|gb|EEF02231.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  114 bits (285), Expect = 9e-24
 Identities = 66/138 (47%), Positives = 85/138 (61%), Gaps = 12/138 (8%)
 Frame = -3

Query: 426 NMDNIVTSQQVVPHG--NNNCGNISQITPIYTPENSSTTA--------VSPVSDLTDCYY 277
           N +++ T   V+PHG   N+ G +S +TP YTPENSST A        VSPVSDLT  YY
Sbjct: 183 NNNDVGTGNLVMPHGVIGNDFG-VSHVTPSYTPENSSTAASSDSFAAQVSPVSDLTTDYY 241

Query: 276 --PTNQSQNQDFFQHNNPIGGGFNDTLISPSGYFNPGMDFQATVEQNNQWXXXXXXXXXX 103
             P N + N D+FQ +    GG+++++ISP+GYFN G+DFQA    +NQW          
Sbjct: 242 YIPVNHNPNPDYFQADQ---GGYSESMISPAGYFNQGLDFQAMEHNSNQW---LMESGDT 295

Query: 102 XXNLWNVEDIWFLKQQFN 49
             NLWN EDIWFL+QQ N
Sbjct: 296 SDNLWNPEDIWFLQQQMN 313


>ref|XP_002311369.1| predicted protein [Populus trichocarpa] gi|222851189|gb|EEE88736.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/127 (46%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
 Frame = -3

Query: 396 VVPHG-NNNCGNISQITPIYTPENSSTTA--------VSPVSDLTDCYY--PTNQSQNQD 250
           + PHG N N   +S +T  YTPENSST A        VSPVSDLT  YY  P N++ N D
Sbjct: 199 MAPHGINGNDFGVSHVTQSYTPENSSTAASSDSFATQVSPVSDLTTDYYNIPVNRNTNPD 258

Query: 249 FFQHNNPIGGGFNDTLISPSGYFNPGMDFQATVEQNNQWXXXXXXXXXXXXNLWNVEDIW 70
           +FQ       G+++++ISP G+FN G+DFQA    +NQW            N+WN+EDIW
Sbjct: 259 YFQAGQV---GYSESMISPPGFFNHGLDFQAMEHSSNQW---PMDSGDTSDNMWNLEDIW 312

Query: 69  FLKQQFN 49
           FL+QQ N
Sbjct: 313 FLQQQLN 319


>gb|ACQ42220.1| R2R3 transcription factor MYB108-like protein 1 [Vitis vinifera]
          Length = 306

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 56/111 (50%), Positives = 70/111 (63%), Gaps = 9/111 (8%)
 Frame = -3

Query: 357 QITPIYTPENSSTTA--------VSPVSDLTDCY-YPTNQSQNQDFFQHNNPIGGGFNDT 205
           Q++  YTPENSST A        VSPVSDLT+ Y +P + +QN DFFQ +     G+ D+
Sbjct: 199 QVSTGYTPENSSTAASSDSFGAQVSPVSDLTEIYNFPVSDNQNPDFFQTDQV---GYTDS 255

Query: 204 LISPSGYFNPGMDFQATVEQNNQWXXXXXXXXXXXXNLWNVEDIWFLKQQF 52
           LISPSGYFN G+DFQ ++E N QW            NLWNVEDIW ++ QF
Sbjct: 256 LISPSGYFNQGLDFQ-SMEPNTQW--YEGGDTATADNLWNVEDIWSVQTQF 303


>ref|XP_002280500.1| PREDICTED: uncharacterized protein LOC100248153 [Vitis vinifera]
           gi|296083206|emb|CBI22842.3| unnamed protein product
           [Vitis vinifera]
          Length = 306

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 56/111 (50%), Positives = 69/111 (62%), Gaps = 9/111 (8%)
 Frame = -3

Query: 357 QITPIYTPENSSTTA--------VSPVSDLTDCY-YPTNQSQNQDFFQHNNPIGGGFNDT 205
           Q++  YTPENSST A        VSPVSDLT+ Y +P + +QN DFFQ       G+ D+
Sbjct: 199 QVSTGYTPENSSTAASSDSFGAQVSPVSDLTEIYNFPVSDNQNPDFFQTGQV---GYTDS 255

Query: 204 LISPSGYFNPGMDFQATVEQNNQWXXXXXXXXXXXXNLWNVEDIWFLKQQF 52
           LISPSGYFN G+DFQ ++E N QW            NLWNVEDIW ++ QF
Sbjct: 256 LISPSGYFNQGLDFQ-SMEPNTQW--YEGGDTATADNLWNVEDIWSVQTQF 303


>emb|CAN63179.1| hypothetical protein VITISV_029107 [Vitis vinifera]
          Length = 306

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 56/111 (50%), Positives = 69/111 (62%), Gaps = 9/111 (8%)
 Frame = -3

Query: 357 QITPIYTPENSSTTA--------VSPVSDLTDCY-YPTNQSQNQDFFQHNNPIGGGFNDT 205
           Q++  YTPENSST A        VSPVSDLT+ Y +P + +QN DFFQ       G+ D+
Sbjct: 199 QVSTGYTPENSSTAASSDSFGAQVSPVSDLTEIYNFPVSDNQNPDFFQTGQV---GYTDS 255

Query: 204 LISPSGYFNPGMDFQATVEQNNQWXXXXXXXXXXXXNLWNVEDIWFLKQQF 52
           LISPSGYFN G+DFQ ++E N QW            NLWNVEDIW ++ QF
Sbjct: 256 LISPSGYFNQGLDFQ-SMEPNTQW--YEGGDTATADNLWNVEDIWSVQTQF 303


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