BLASTX nr result

ID: Atractylodes21_contig00022160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00022160
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   308   7e-82
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]         308   7e-82
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]      308   7e-82
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...   304   1e-80
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]   304   1e-80

>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
          Length = 1002

 Score =  308 bits (789), Expect = 7e-82
 Identities = 145/161 (90%), Positives = 157/161 (97%)
 Frame = +3

Query: 3    LGDCAKVIAMKNNPVQWTTPLGLPVVQPYRKLGRRLIKTSLQTLTLQRETDKVMVKRQRT 182
            LGDCAK+IAM+N+PV+WTTPLGLPVVQPYRKLGR LIKTSLQ LTLQRETDKVMVKRQRT
Sbjct: 842  LGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRT 901

Query: 183  AFPPNFVHSLDGSHMMMTAIACKEAGLRFAGVHDSFWTHACDVDQMNRILREKFVELYEA 362
            AFPPNFVHSLDGSHMMMTAIACKE+GL FAGVHDS+WTHACDVDQMN+ILREKFVELY+A
Sbjct: 902  AFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDA 961

Query: 363  PILENLLESFQKSFPKLEFPPLPERGDFDLKEVLKSPYFFN 485
            PILENLLESFQ+SFP L+FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 962  PILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score =  308 bits (789), Expect = 7e-82
 Identities = 145/161 (90%), Positives = 157/161 (97%)
 Frame = +3

Query: 3    LGDCAKVIAMKNNPVQWTTPLGLPVVQPYRKLGRRLIKTSLQTLTLQRETDKVMVKRQRT 182
            LGDCAK+IAM+N+PV+WTTPLGLPVVQPYRKLGR LIKTSLQ LTLQRETDKVMVKRQRT
Sbjct: 842  LGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRT 901

Query: 183  AFPPNFVHSLDGSHMMMTAIACKEAGLRFAGVHDSFWTHACDVDQMNRILREKFVELYEA 362
            AFPPNFVHSLDGSHMMMTAIACKE+GL FAGVHDS+WTHACDVDQMN+ILREKFVELY+A
Sbjct: 902  AFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDA 961

Query: 363  PILENLLESFQKSFPKLEFPPLPERGDFDLKEVLKSPYFFN 485
            PILENLLESFQ+SFP L+FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 962  PILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
          Length = 715

 Score =  308 bits (789), Expect = 7e-82
 Identities = 145/161 (90%), Positives = 157/161 (97%)
 Frame = +3

Query: 3    LGDCAKVIAMKNNPVQWTTPLGLPVVQPYRKLGRRLIKTSLQTLTLQRETDKVMVKRQRT 182
            LGDCAK+IAM+N+PV+WTTPLGLPVVQPYRKLGR LIKTSLQ LTLQRETDKVMVKRQRT
Sbjct: 555  LGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRT 614

Query: 183  AFPPNFVHSLDGSHMMMTAIACKEAGLRFAGVHDSFWTHACDVDQMNRILREKFVELYEA 362
            AFPPNFVHSLDGSHMMMTAIACKE+GL FAGVHDS+WTHACDVDQMN+ILREKFVELY+A
Sbjct: 615  AFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDA 674

Query: 363  PILENLLESFQKSFPKLEFPPLPERGDFDLKEVLKSPYFFN 485
            PILENLLESFQ+SFP L+FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 675  PILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 715


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
            Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 1; Flags: Precursor
            gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
            subunit RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  304 bits (779), Expect = 1e-80
 Identities = 144/161 (89%), Positives = 156/161 (96%)
 Frame = +3

Query: 3    LGDCAKVIAMKNNPVQWTTPLGLPVVQPYRKLGRRLIKTSLQTLTLQRETDKVMVKRQRT 182
            LGDCAK+IAM+N+PV+WTTPLGLPVVQPYRKLGR LIKTSLQ LTLQRETDKVMVKRQRT
Sbjct: 842  LGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRT 901

Query: 183  AFPPNFVHSLDGSHMMMTAIACKEAGLRFAGVHDSFWTHACDVDQMNRILREKFVELYEA 362
            AFPPNFVHSLDGSHMMMTAIACKE+GL FAGVHDS+WTHA DVDQMN+ILREKFVELY+A
Sbjct: 902  AFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDA 961

Query: 363  PILENLLESFQKSFPKLEFPPLPERGDFDLKEVLKSPYFFN 485
            PILENLLESFQ+SFP L+FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 962  PILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  304 bits (779), Expect = 1e-80
 Identities = 144/161 (89%), Positives = 156/161 (96%)
 Frame = +3

Query: 3    LGDCAKVIAMKNNPVQWTTPLGLPVVQPYRKLGRRLIKTSLQTLTLQRETDKVMVKRQRT 182
            LGDCAK+IAM+N+PV+WTTPLGLPVVQPYRKLGR LIKTSLQ LTLQRETDKVMVKRQRT
Sbjct: 842  LGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRT 901

Query: 183  AFPPNFVHSLDGSHMMMTAIACKEAGLRFAGVHDSFWTHACDVDQMNRILREKFVELYEA 362
            AFPPNFVHSLDGSHMMMTAIACKE+GL FAGVHDS+WTHA DVDQMN+ILREKFVELY+A
Sbjct: 902  AFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDA 961

Query: 363  PILENLLESFQKSFPKLEFPPLPERGDFDLKEVLKSPYFFN 485
            PILENLLESFQ+SFP L+FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 962  PILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


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