BLASTX nr result

ID: Atractylodes21_contig00021862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021862
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...   105   5e-21
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   103   1e-20
ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...   103   2e-20
ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein...    99   3e-19
ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...    99   4e-19

>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 305

 Score =  105 bits (261), Expect = 5e-21
 Identities = 61/160 (38%), Positives = 84/160 (52%)
 Frame = +1

Query: 1   QGQLIDITMVEFCDDELLLYVADRSSQLRRLEIASRFAYMFGNWTKALKKFPLLEELSLY 180
           +G LI I++  F  D L+ Y+ADRSS L+RL + S +      ++KA KKFPLLEEL + 
Sbjct: 90  RGGLISISIEYFATDSLIKYIADRSSHLKRLRLLSSYTLSDAAFSKAAKKFPLLEELDIS 149

Query: 181 STDISKEAIETAGRYCPMLKTLKLNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 360
              +S EA+   G  CP+L++LKLN                                   
Sbjct: 150 YCSLSTEALVGVGISCPLLRSLKLN----CQGYKRPHIESNEEALAIGQWMPHLRYLQIF 205

Query: 361 GESMSNIGLLAILDGCRHLKSLDLRQCLCIDLKGDLGKRC 480
           G  ++N G+ AILDGC HL+ LDLRQC  + L+G+LG  C
Sbjct: 206 GNKLTNDGVQAILDGCPHLEFLDLRQCFNVHLEGELGMLC 245


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/159 (37%), Positives = 81/159 (50%)
 Frame = +1

Query: 4   GQLIDITMVEFCDDELLLYVADRSSQLRRLEIASRFAYMFGNWTKALKKFPLLEELSLYS 183
           GQL+ I + +F  D LL Y+ DRSS +R L + S +       ++ +K+ PLL E+ L  
Sbjct: 92  GQLLSICIDDFATDNLLNYIIDRSSHIRHLRLVSCYGISDDGLSEGIKRLPLLVEIDLCY 151

Query: 184 TDISKEAIETAGRYCPMLKTLKLNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVG 363
              SKE +E  G+ CP LK+ +LN                                   G
Sbjct: 152 CSFSKEVLEAIGQCCPRLKSFRLN----CQGFRHPHIECDEEALAIAQNMPGLKSLQLFG 207

Query: 364 ESMSNIGLLAILDGCRHLKSLDLRQCLCIDLKGDLGKRC 480
             ++N GLLAILDGC HL+SLDLRQC  ++L G+L KRC
Sbjct: 208 NKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKRC 246


>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score =  103 bits (256), Expect = 2e-20
 Identities = 62/160 (38%), Positives = 83/160 (51%)
 Frame = +1

Query: 1   QGQLIDITMVEFCDDELLLYVADRSSQLRRLEIASRFAYMFGNWTKALKKFPLLEELSLY 180
           QG L++I +  F  DELL Y+ADRSS LR L +   +      + +A+ K PL+E L L 
Sbjct: 418 QGGLVEIDIWYFGTDELLNYIADRSSNLRTLRLIMCYPIADEGFIEAVVKLPLIEYLELS 477

Query: 181 STDISKEAIETAGRYCPMLKTLKLNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 360
              +S E+++  G+ CP LKTLKLN                                   
Sbjct: 478 HCSLSGESLKVVGQSCPNLKTLKLNS--EPDPKFNDDEFNNEEALAIAESMPELRHLQLF 535

Query: 361 GESMSNIGLLAILDGCRHLKSLDLRQCLCIDLKGDLGKRC 480
           G  ++N+GL AILDGC HL+ LDLR+C  +DL GDL KRC
Sbjct: 536 GNILTNVGLNAILDGCPHLEHLDLRKCSNVDLTGDLEKRC 575



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 57/168 (33%), Positives = 76/168 (45%), Gaps = 8/168 (4%)
 Frame = +1

Query: 1   QGQLIDITMVEFCDDELLLYVADR--------SSQLRRLEIASRFAYMFGNWTKALKKFP 156
           QG L++I +  F  D+LL Y+ADR        SS LR L +            +A+ K P
Sbjct: 80  QGGLLEIDIEYFGTDKLLDYIADRFSLSLFSISSNLRSLRLVRCHQITDKGVAEAVVKLP 139

Query: 157 LLEELSLYSTDISKEAIETAGRYCPMLKTLKLNQXXXXXXXXXXXXXXXXXXXXXXXXXX 336
           LLE+L +     S E +   G+ CP L TLKLN+                          
Sbjct: 140 LLEDLEVSYCSFSGECLSVVGQSCPHLTTLKLNR---RPRVEFVINMRDHNAIAIAESMP 196

Query: 337 XXXXXXXVGESMSNIGLLAILDGCRHLKSLDLRQCLCIDLKGDLGKRC 480
                  +G +++N GL AILD C HL  LDLRQC  I+L  D  K+C
Sbjct: 197 ELRHLQLLGNALTNTGLNAILDSCTHLDHLDLRQCYNINLVEDFMKQC 244


>ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus] gi|449490717|ref|XP_004158686.1| PREDICTED:
           putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 318

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 59/160 (36%), Positives = 81/160 (50%)
 Frame = +1

Query: 1   QGQLIDITMVEFCDDELLLYVADRSSQLRRLEIASRFAYMFGNWTKALKKFPLLEELSLY 180
           +G LIDI++  F  D LLLY+A RS++L+RL IA  F        KA  K PLLE+L ++
Sbjct: 77  RGHLIDISIESFATDSLLLYIARRSNELKRLWIADCFCISDMGLIKAASKLPLLEQLEIF 136

Query: 181 STDISKEAIETAGRYCPMLKTLKLNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 360
                   + T GR CP+LK+LKLNQ                                  
Sbjct: 137 LCCFDSRTLGTVGRCCPLLKSLKLNQ----QFCTGKGMECDREALAIAKTMPKLRHLQIF 192

Query: 361 GESMSNIGLLAILDGCRHLKSLDLRQCLCIDLKGDLGKRC 480
           G ++++ GL AIL+GC  L+SLDLR C  +  +G+LG  C
Sbjct: 193 GNALTDKGLQAILNGCPDLESLDLRHCFNLKFEGELGNMC 232


>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 59/164 (35%), Positives = 83/164 (50%), Gaps = 5/164 (3%)
 Frame = +1

Query: 4   GQLIDITMVEFCDDELLLYVADRSSQLRRLEIASRFAYMFGNWTKALKKFPLLEELSLYS 183
           G +IDI +  F  D+LL  +A+ +S L+RL +AS ++        A +KFP LEEL +  
Sbjct: 95  GHIIDINIEYFGTDDLLHRIANSASHLQRLRLASCWSISDEGLCDAAEKFPCLEELDISI 154

Query: 184 TDISKEAIETAGRYCPMLKTLKLN-----QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 348
           +++S    E  GR CP LKTLK N                                    
Sbjct: 155 SNLSDRLFEPIGRRCPRLKTLKFNSQGYRHPHIQYDDDDEDAYDDNEAFAIAKYMPGLRH 214

Query: 349 XXXVGESMSNIGLLAILDGCRHLKSLDLRQCLCIDLKGDLGKRC 480
              +G  M+N GL+A+LDGC HL+SLD+R+C  ++L G LGKRC
Sbjct: 215 LQLIGNEMTNDGLVALLDGCPHLESLDIRRCFNVNLVGTLGKRC 258


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