BLASTX nr result
ID: Atractylodes21_contig00021670
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00021670
(1304 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 79 6e-23
emb|CBI29360.3| unnamed protein product [Vitis vinifera] 79 6e-23
ref|XP_002527095.1| polyadenylate-binding protein, putative [Ric... 77 9e-19
emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera] 79 9e-19
ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-l... 68 2e-18
>ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 79.0 bits (193), Expect(2) = 6e-23
Identities = 42/87 (48%), Positives = 53/87 (60%)
Frame = +1
Query: 298 VMVDQRGVSRGFGFVAFSTLEEAKKAMVVMTGKMVGRKRLYVTVALPKLERMXXXXXXXX 477
VM+D +G+S+G GFVAF T EEA +A+ VM GKM+GRK LYV VA K ER
Sbjct: 787 VMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQRKEERKARLQAQFA 846
Query: 478 XXXXPRPVTPLLGGILGLHASAPNPSP 558
P +TPL G+ G H+ AP +P
Sbjct: 847 QIRSPGAMTPLQSGVPGFHSGAPRLAP 873
Score = 56.2 bits (134), Expect(2) = 6e-23
Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Frame = +3
Query: 555 PQLLYFDQGNSGLLP--PSGFGFPQRN*GLLPPCGVRPSTF--LMVTYTP*RQGLVENHL 722
PQ LYF QG GL+P P+G+GF Q+ L+P G+RP ++ Y RQG +
Sbjct: 873 PQQLYFGQGTPGLIPTQPAGYGFQQQ---LMP--GMRPGVAPNFIMPYQLQRQGQPGQRM 927
Query: 723 GPIRIGSPEAMP*QLMP---DGPKQCFGYMFNGQNLVDHQMVP 842
G R G+ + M Q P Q + YM NG+N VD MVP
Sbjct: 928 GVRRGGNSQQMQHQQQPLLHRNSNQSYRYMANGRNGVDPSMVP 970
>emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 79.0 bits (193), Expect(2) = 6e-23
Identities = 42/87 (48%), Positives = 53/87 (60%)
Frame = +1
Query: 298 VMVDQRGVSRGFGFVAFSTLEEAKKAMVVMTGKMVGRKRLYVTVALPKLERMXXXXXXXX 477
VM+D +G+S+G GFVAF T EEA +A+ VM GKM+GRK LYV VA K ER
Sbjct: 327 VMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQRKEERKARLQAQFA 386
Query: 478 XXXXPRPVTPLLGGILGLHASAPNPSP 558
P +TPL G+ G H+ AP +P
Sbjct: 387 QIRSPGAMTPLQSGVPGFHSGAPRLAP 413
Score = 56.2 bits (134), Expect(2) = 6e-23
Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Frame = +3
Query: 555 PQLLYFDQGNSGLLP--PSGFGFPQRN*GLLPPCGVRPSTF--LMVTYTP*RQGLVENHL 722
PQ LYF QG GL+P P+G+GF Q+ L+P G+RP ++ Y RQG +
Sbjct: 413 PQQLYFGQGTPGLIPTQPAGYGFQQQ---LMP--GMRPGVAPNFIMPYQLQRQGQPGQRM 467
Query: 723 GPIRIGSPEAMP*QLMP---DGPKQCFGYMFNGQNLVDHQMVP 842
G R G+ + M Q P Q + YM NG+N VD MVP
Sbjct: 468 GVRRGGNSQQMQHQQQPLLHRNSNQSYRYMANGRNGVDPSMVP 510
>ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding
protein, putative [Ricinus communis]
Length = 657
Score = 77.0 bits (188), Expect(2) = 9e-19
Identities = 42/87 (48%), Positives = 52/87 (59%)
Frame = +1
Query: 298 VMVDQRGVSRGFGFVAFSTLEEAKKAMVVMTGKMVGRKRLYVTVALPKLERMXXXXXXXX 477
VM+D +GVS+G GFVAFST EEA +A+ M GKM+GRK LYV +A K ER
Sbjct: 359 VMLDHQGVSKGSGFVAFSTPEEASRALKEMNGKMIGRKPLYVAIAQRKEERKARLQAHFA 418
Query: 478 XXXXPRPVTPLLGGILGLHASAPNPSP 558
P + PL GI G +A AP +P
Sbjct: 419 LVRAPGALAPLPSGIPGYNAGAPRLAP 445
Score = 43.9 bits (102), Expect(2) = 9e-19
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Frame = +3
Query: 555 PQLLYFDQGNSGLLPP--SGFGFPQRN*GLLPPCGVRPSTFLMVTYTP*RQGLVENHLGP 728
PQ LYF QG G++PP +G+GF Q+ + P V P+ ++ Y RQG +G
Sbjct: 445 PQQLYFGQGTPGMMPPQHAGYGFQQQILTSMRP-AVGPN--FIIPYHLQRQGQPGQRMGM 501
Query: 729 IRIGSPEAM--P*QLMPDGPKQCFGYMFNGQNLVDHQMVP 842
R G+P+ M QL+ Q Y+ N +N + +VP
Sbjct: 502 RRGGNPQQMQQQQQLLHRNNNQGLRYVGNARNSGNSSVVP 541
>emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
Length = 632
Score = 79.0 bits (193), Expect(2) = 9e-19
Identities = 42/87 (48%), Positives = 53/87 (60%)
Frame = +1
Query: 298 VMVDQRGVSRGFGFVAFSTLEEAKKAMVVMTGKMVGRKRLYVTVALPKLERMXXXXXXXX 477
VM+D +G+S+G GFVAF T EEA +A+ VM GKM+GRK LYV VA K ER
Sbjct: 353 VMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQRKEERKARLQAQFA 412
Query: 478 XXXXPRPVTPLLGGILGLHASAPNPSP 558
P +TPL G+ G H+ AP +P
Sbjct: 413 QIRSPGAMTPLQSGVPGFHSGAPRLAP 439
Score = 42.0 bits (97), Expect(2) = 9e-19
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +3
Query: 555 PQLLYFDQGNSGLLP--PSGFGFPQRN*GLLPPCGVRPSTF--LMVTYTP*RQGLVENHL 722
PQ LYF QG GL+P P+G+GF Q+ L+P G+RP ++ Y RQG +
Sbjct: 439 PQQLYFGQGTPGLIPTQPAGYGFQQQ---LMP--GMRPGVAPNFIMPYQLQRQGQPGQRM 493
Query: 723 GPIRIGSPEAMP*QLMP 773
G R G+ + M Q P
Sbjct: 494 GVRRGGNSQQMQHQQQP 510
>ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 68.2 bits (165), Expect(2) = 2e-18
Identities = 42/92 (45%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +1
Query: 298 VMVDQRGVSRGFGFVAFSTLEEAKKAMVVMTGKMVGRKRLYVTVALPKLERMXXXXXXXX 477
VM+DQ G+S+G GFVAFS+ +EA KA+ M GKM GRK LYV VA K ER
Sbjct: 348 VMLDQHGLSKGSGFVAFSSPDEATKALNEMNGKMKGRKPLYVAVAQRKEERKARLQAQFA 407
Query: 478 XXXXPRPVTPLLGGILGLHASAPNPSPN--YY 567
++ L GI G H A SP YY
Sbjct: 408 QIRAAGGISSLPSGIPGFHPGAARVSPQQMYY 439
Score = 51.6 bits (122), Expect(2) = 2e-18
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +3
Query: 555 PQLLYFDQGNSGLLP--PSGFGF-PQRN*GLLPPCGVRPSTFLMVTYTP*RQGLVENHLG 725
PQ +Y+ QGN GL P P+G+GF PQ G+ P G FLM Y RQG LG
Sbjct: 434 PQQMYYGQGNPGLAPPQPAGYGFQPQLMSGMRPGMG---PNFLM-PYQFQRQGQPGPRLG 489
Query: 726 PIRIGSPEAMP*QLMP-DGPKQCFGYMFNGQNLVDHQMVP 842
R G+ + +P Q +P G Q F YM N +N ++ ++P
Sbjct: 490 VRRGGNSQPLPQQQLPLRGYGQSFRYMNNARNGLETPVLP 529