BLASTX nr result

ID: Atractylodes21_contig00021659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021659
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322240.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-10
emb|CAN81788.1| hypothetical protein VITISV_026009 [Vitis vinifera]    59   4e-10
ref|XP_002279752.2| PREDICTED: WD repeat-containing protein 18-l...    59   4e-10
ref|XP_002511209.1| WD-repeat protein, putative [Ricinus communi...    51   6e-08
emb|CAN76074.1| hypothetical protein VITISV_018240 [Vitis vinifera]    56   3e-06

>ref|XP_002322240.1| predicted protein [Populus trichocarpa] gi|222869236|gb|EEF06367.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score = 57.8 bits (138), Expect(2) = 2e-10
 Identities = 27/40 (67%), Positives = 30/40 (75%)
 Frame = -3

Query: 151 SIRAMTFSRSSLISASDDCIACLWDVVEGAIIRRFHHPKG 32
           SI A+TFS   LISAS+DC  CLWDVV   IIRRF+H KG
Sbjct: 279 SIMALTFSSVGLISASEDCTVCLWDVVGQVIIRRFNHKKG 318



 Score = 32.0 bits (71), Expect(2) = 2e-10
 Identities = 14/26 (53%), Positives = 21/26 (80%)
 Frame = -2

Query: 251 ADRFLFSGSADGRIFMSPCWIGLMKE 174
           A++ LF+GS DGRIF+S   IGL+++
Sbjct: 236 AEQLLFAGSMDGRIFVSVLDIGLLED 261


>emb|CAN81788.1| hypothetical protein VITISV_026009 [Vitis vinifera]
          Length = 503

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 29/47 (61%), Positives = 32/47 (68%)
 Frame = -3

Query: 172 VLLIQRESIRAMTFSRSSLISASDDCIACLWDVVEGAIIRRFHHPKG 32
           VL     SI A+ FSR  L+SAS DC A LWDV  G IIRRF+HPKG
Sbjct: 298 VLNGHNRSITALAFSRLGLVSASRDCAAHLWDVASGVIIRRFNHPKG 344



 Score = 30.0 bits (66), Expect(2) = 4e-10
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -2

Query: 248 DRFLFSGSADGRIFMSPCWIGLM 180
           ++ LFSGSADGRIF+S    GL+
Sbjct: 263 EQLLFSGSADGRIFVSMLDTGLV 285


>ref|XP_002279752.2| PREDICTED: WD repeat-containing protein 18-like [Vitis vinifera]
          Length = 476

 Score = 58.9 bits (141), Expect(2) = 4e-10
 Identities = 29/47 (61%), Positives = 32/47 (68%)
 Frame = -3

Query: 172 VLLIQRESIRAMTFSRSSLISASDDCIACLWDVVEGAIIRRFHHPKG 32
           VL     SI A+ FSR  L+SAS DC A LWDV  G IIRRF+HPKG
Sbjct: 271 VLNGHNRSITALAFSRLGLVSASRDCAAHLWDVASGVIIRRFNHPKG 317



 Score = 30.0 bits (66), Expect(2) = 4e-10
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -2

Query: 248 DRFLFSGSADGRIFMSPCWIGLM 180
           ++ LFSGSADGRIF+S    GL+
Sbjct: 236 EQLLFSGSADGRIFVSMLDTGLV 258


>ref|XP_002511209.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550324|gb|EEF51811.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 471

 Score = 50.8 bits (120), Expect(2) = 6e-08
 Identities = 25/47 (53%), Positives = 31/47 (65%)
 Frame = -3

Query: 172 VLLIQRESIRAMTFSRSSLISASDDCIACLWDVVEGAIIRRFHHPKG 32
           VL   + SI A+TFS   LISAS+DC  CLWD V    I+RF++ KG
Sbjct: 269 VLEGHKGSITALTFSTLGLISASEDCTICLWDAVSWVAIQRFNYHKG 315



 Score = 30.8 bits (68), Expect(2) = 6e-08
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = -2

Query: 248 DRFLFSGSADGRIFMSPCWIGLMKE 174
           D+FLF+G  DGRIF+S   +GL+ +
Sbjct: 234 DQFLFAGCIDGRIFVSMLNVGLVDD 258


>emb|CAN76074.1| hypothetical protein VITISV_018240 [Vitis vinifera]
          Length = 184

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/47 (57%), Positives = 33/47 (70%)
 Frame = -3

Query: 172 VLLIQRESIRAMTFSRSSLISASDDCIACLWDVVEGAIIRRFHHPKG 32
           ++L   +SI A+ FSR  L+SAS D  A LWDV  G IIRRF+HPKG
Sbjct: 19  IVLNGHKSITALAFSRLGLVSASRDYTAHLWDVASGVIIRRFNHPKG 65


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