BLASTX nr result

ID: Atractylodes21_contig00021648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021648
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002465088.1| hypothetical protein SORBIDRAFT_01g031880 [S...   180   9e-44
ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, p...   180   1e-43
ref|XP_002307293.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_003562367.1| PREDICTED: sigma factor sigB regulation prot...   178   4e-43
dbj|BAJ95275.1| predicted protein [Hordeum vulgare subsp. vulgare]    178   5e-43

>ref|XP_002465088.1| hypothetical protein SORBIDRAFT_01g031880 [Sorghum bicolor]
           gi|241918942|gb|EER92086.1| hypothetical protein
           SORBIDRAFT_01g031880 [Sorghum bicolor]
          Length = 271

 Score =  180 bits (457), Expect = 9e-44
 Identities = 85/122 (69%), Positives = 104/122 (85%)
 Frame = +2

Query: 8   CIFVGHSLSCMVSLIASIIRPDLFVKLVMLSASCRFVNTHDFYGGFEQHEVDELSEAMKR 187
           CI+VGHS+S ++  +ASI RPDLF KLV+LSAS R++N  D+YGGFEQ E+DEL EAM+ 
Sbjct: 90  CIYVGHSVSAVIGALASISRPDLFTKLVLLSASPRYLNDVDYYGGFEQDELDELFEAMRS 149

Query: 188 NYESWCAGFAPLVVGGDMESVALQEFSRTLFNMRPDIALCTFQMIFESDLRNLLRLVPVP 367
           NY++WC+GFAPL VGGDMESVA+QEFSRTLFN+RPDIAL   Q IF+SD+R+LL LV VP
Sbjct: 150 NYKAWCSGFAPLCVGGDMESVAVQEFSRTLFNIRPDIALSVAQTIFQSDVRSLLPLVSVP 209

Query: 368 CH 373
           CH
Sbjct: 210 CH 211


>ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, putative [Ricinus
           communis] gi|223535801|gb|EEF37463.1| sigma factor sigb
           regulation protein rsbq, putative [Ricinus communis]
          Length = 270

 Score =  180 bits (456), Expect = 1e-43
 Identities = 81/122 (66%), Positives = 105/122 (86%)
 Frame = +2

Query: 8   CIFVGHSLSCMVSLIASIIRPDLFVKLVMLSASCRFVNTHDFYGGFEQHEVDELSEAMKR 187
           C+FVGHS+S MV ++ASI RPDLF K+VM+SAS R++N  D+YGGFEQ ++++L EAM+ 
Sbjct: 89  CVFVGHSVSAMVGVVASISRPDLFTKIVMISASPRYLNDVDYYGGFEQEDLNQLFEAMEA 148

Query: 188 NYESWCAGFAPLVVGGDMESVALQEFSRTLFNMRPDIALCTFQMIFESDLRNLLRLVPVP 367
           NY++WC+GFAPL VGGDM+SVA+QEFSRTLFNMRPDIAL   Q IF+SD+R++L +V VP
Sbjct: 149 NYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIALSVAQTIFQSDMRSILHMVSVP 208

Query: 368 CH 373
           CH
Sbjct: 209 CH 210


>ref|XP_002307293.1| predicted protein [Populus trichocarpa] gi|222856742|gb|EEE94289.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  179 bits (455), Expect = 2e-43
 Identities = 84/122 (68%), Positives = 103/122 (84%)
 Frame = +2

Query: 8   CIFVGHSLSCMVSLIASIIRPDLFVKLVMLSASCRFVNTHDFYGGFEQHEVDELSEAMKR 187
           CIFVGHS+S MV +IASI RPDLF K+VMLSAS R++N  D+YGGFEQ ++D+L EAM+ 
Sbjct: 89  CIFVGHSVSGMVGVIASISRPDLFSKIVMLSASPRYLNDVDYYGGFEQEDLDQLFEAMQN 148

Query: 188 NYESWCAGFAPLVVGGDMESVALQEFSRTLFNMRPDIALCTFQMIFESDLRNLLRLVPVP 367
           NY++WC+GFAPL VGGDM+S+A+QEFSRTLFNMRPDIAL   Q IF SD+R +L +V VP
Sbjct: 149 NYKAWCSGFAPLAVGGDMDSIAVQEFSRTLFNMRPDIALSVAQTIFHSDMRAILHMVTVP 208

Query: 368 CH 373
           CH
Sbjct: 209 CH 210


>ref|XP_003562367.1| PREDICTED: sigma factor sigB regulation protein rsbQ-like isoform 1
           [Brachypodium distachyon]
           gi|357121319|ref|XP_003562368.1| PREDICTED: sigma factor
           sigB regulation protein rsbQ-like isoform 2
           [Brachypodium distachyon]
          Length = 271

 Score =  178 bits (452), Expect = 4e-43
 Identities = 83/122 (68%), Positives = 105/122 (86%)
 Frame = +2

Query: 8   CIFVGHSLSCMVSLIASIIRPDLFVKLVMLSASCRFVNTHDFYGGFEQHEVDELSEAMKR 187
           CI+VGHS+S ++ ++ASI RPDLF KLV+LSAS R++N  D+YGGFEQ E+DEL EA++ 
Sbjct: 90  CIYVGHSVSAVIGVLASISRPDLFSKLVLLSASPRYLNDVDYYGGFEQEELDELFEAIRS 149

Query: 188 NYESWCAGFAPLVVGGDMESVALQEFSRTLFNMRPDIALCTFQMIFESDLRNLLRLVPVP 367
           NY++WC+GFAPL VGGD+ESVA+QEFSRTLFN+RPDIAL   Q IF+SD+R+LL LV VP
Sbjct: 150 NYKAWCSGFAPLCVGGDLESVAVQEFSRTLFNIRPDIALSVAQTIFQSDVRSLLSLVTVP 209

Query: 368 CH 373
           CH
Sbjct: 210 CH 211


>dbj|BAJ95275.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 271

 Score =  178 bits (451), Expect = 5e-43
 Identities = 83/122 (68%), Positives = 104/122 (85%)
 Frame = +2

Query: 8   CIFVGHSLSCMVSLIASIIRPDLFVKLVMLSASCRFVNTHDFYGGFEQHEVDELSEAMKR 187
           CI+VGHS+S ++ ++ASI RPDLF KLV+LSAS R++N  D+YGGFEQ E+DEL EAM+ 
Sbjct: 90  CIYVGHSVSAVIGVLASISRPDLFSKLVLLSASPRYLNDVDYYGGFEQEELDELFEAMRS 149

Query: 188 NYESWCAGFAPLVVGGDMESVALQEFSRTLFNMRPDIALCTFQMIFESDLRNLLRLVPVP 367
           NY++WC+GFAPL VGGD+ESV++QEFSRTLFN+RPDIAL   Q IF+SD+R LL LV VP
Sbjct: 150 NYKAWCSGFAPLCVGGDLESVSVQEFSRTLFNIRPDIALSVAQTIFQSDVRTLLPLVSVP 209

Query: 368 CH 373
           CH
Sbjct: 210 CH 211


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