BLASTX nr result

ID: Atractylodes21_contig00021647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021647
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265279.1| PREDICTED: U3 small nucleolar ribonucleoprot...    94   1e-17
ref|NP_176564.1| Ribosomal RNA processing Brix domain protein [A...    93   2e-17
ref|XP_002297757.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002304782.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
gb|ABK93432.1| unknown [Populus trichocarpa]                           93   2e-17

>ref|XP_002265279.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Vitis
           vinifera] gi|147790699|emb|CAN61017.1| hypothetical
           protein VITISV_041221 [Vitis vinifera]
           gi|296081284|emb|CBI17728.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 43/53 (81%), Positives = 49/53 (92%)
 Frame = +1

Query: 1   GGPKSIELKEVGPRFELRLYQIKLGTVDQDEAQTEWVLRSFMNTSKKQKVLGE 159
           GGPKSIELKEVGPRFELRLYQIKLGT+DQ EAQ EWV+R +MNT+KK+K LG+
Sbjct: 241 GGPKSIELKEVGPRFELRLYQIKLGTMDQSEAQIEWVIRPYMNTTKKRKFLGD 293


>ref|NP_176564.1| Ribosomal RNA processing Brix domain protein [Arabidopsis thaliana]
           gi|12324948|gb|AAG52427.1|AC011622_15 putative U3 small
           nucleolar ribonucleoprotein protein; 1537-3735
           [Arabidopsis thaliana]
           gi|12325007|gb|AAG52449.1|AC010852_6 putative U3 small
           nucleolar ribonucleoprotein protein; 73469-75667
           [Arabidopsis thaliana] gi|20260206|gb|AAM13001.1|
           putative U3 small nucleolar ribonucleoprotein protein
           [Arabidopsis thaliana] gi|21387041|gb|AAM47924.1|
           putative U3 small nucleolar ribonucleoprotein protein
           [Arabidopsis thaliana] gi|21593725|gb|AAM65692.1|
           putative U3 small nucleolar ribonucleoprotein
           [Arabidopsis thaliana] gi|332196027|gb|AEE34148.1|
           Ribosomal RNA processing Brix domain protein
           [Arabidopsis thaliana]
          Length = 294

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/53 (77%), Positives = 50/53 (94%)
 Frame = +1

Query: 1   GGPKSIELKEVGPRFELRLYQIKLGTVDQDEAQTEWVLRSFMNTSKKQKVLGE 159
           GGPKSIELKE+GPRFELRLYQ+KLGTV+Q+EA+ EWV+R +MNTSKK+K +GE
Sbjct: 242 GGPKSIELKEIGPRFELRLYQVKLGTVEQNEAEIEWVIRPYMNTSKKRKFIGE 294


>ref|XP_002297757.1| predicted protein [Populus trichocarpa] gi|222845015|gb|EEE82562.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/53 (77%), Positives = 49/53 (92%)
 Frame = +1

Query: 1   GGPKSIELKEVGPRFELRLYQIKLGTVDQDEAQTEWVLRSFMNTSKKQKVLGE 159
           GGPKS+ELKE+GPRFE+RLYQIKLGTVDQ EAQ EWVLR +MNT+KK+K +G+
Sbjct: 241 GGPKSVELKEIGPRFEMRLYQIKLGTVDQTEAQNEWVLRPYMNTTKKRKFIGD 293


>ref|XP_002304782.1| predicted protein [Populus trichocarpa] gi|222842214|gb|EEE79761.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/53 (77%), Positives = 49/53 (92%)
 Frame = +1

Query: 1   GGPKSIELKEVGPRFELRLYQIKLGTVDQDEAQTEWVLRSFMNTSKKQKVLGE 159
           GGPKS+ELKE+GPRFE+RLYQIKLGTVDQ EAQ EWVLR +MNT+KK+K +G+
Sbjct: 241 GGPKSVELKEIGPRFEMRLYQIKLGTVDQTEAQNEWVLRPYMNTTKKRKFIGD 293


>gb|ABK93432.1| unknown [Populus trichocarpa]
          Length = 293

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/53 (77%), Positives = 49/53 (92%)
 Frame = +1

Query: 1   GGPKSIELKEVGPRFELRLYQIKLGTVDQDEAQTEWVLRSFMNTSKKQKVLGE 159
           GGPKS+ELKE+GPRFE+RLYQIKLGTVDQ EAQ EWVLR +MNT+KK+K +G+
Sbjct: 241 GGPKSVELKEIGPRFEMRLYQIKLGTVDQTEAQNEWVLRPYMNTTKKRKFIGD 293


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