BLASTX nr result
ID: Atractylodes21_contig00021645
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00021645
(799 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 93 4e-35
ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789... 80 4e-34
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf... 79 3e-30
gb|AAD25830.1| putative retroelement pol polyprotein [Arabidopsi... 72 7e-29
gb|ACB45089.1| putative polyprotein [Solanum habrochaites] 77 4e-26
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 92.8 bits (229), Expect(3) = 4e-35
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = +1
Query: 7 PGYTFFKVFGCLAFASTTPSHRTKLEPRARTCVFIG*PMGMKAYKMSDLDTCHVFCSRDV 186
P Y K FGCL ++ST+P R K EPRAR CVF+G P+G K YK+ D++T V SR V
Sbjct: 759 PAYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVSISRHV 818
Query: 187 VFHESVFPFRQVSRSTSVDD-FPLASIPTASIHDDARCRDSTMV 315
+FHE +FPF + + D FPL P + DD ++++
Sbjct: 819 IFHEDIFPFISSTIKDDIKDFFPLLQFPART--DDLPLEQTSII 860
Score = 61.2 bits (147), Expect(3) = 4e-35
Identities = 34/103 (33%), Positives = 52/103 (50%)
Frame = +2
Query: 425 SSKIRTKPSYLRDYHCNLVDIEDKSSKPYSLSKYVL*QVVLLSIRHILAISS*FEPRFYH 604
S + + P +L+D+HC + +++P+ I I++ P+ Y
Sbjct: 881 SKRQKKPPKHLQDFHCY-----NNTTEPFHA--------------FINNITNAVIPQRYS 921
Query: 605 EAVKYKEWRDAMHVELKAMKDNNTWSIVPLPAGKHFVGCKWVY 733
EA +K W DAM E+ AM NTWS+V LP K +GCKWV+
Sbjct: 922 EAKDFKAWCDAMKEEIGAMVRTNTWSVVSLPPNKKAIGCKWVF 964
Score = 41.2 bits (95), Expect(3) = 4e-35
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 739 KHHADGSIERYKARLVAKGF 798
KH+ADGSIERYKARLVAKG+
Sbjct: 967 KHNADGSIERYKARLVAKGY 986
>ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max]
Length = 2412
Score = 79.7 bits (195), Expect(3) = 4e-34
Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Frame = +2
Query: 419 RRSSKIRTKPSYLRDYHCNLVDIEDKSSKPYSLSKYVL*QVVLLSI------RHILAISS 580
R+S ++ P+YL +YHCNL+ +S P S Y L V+ R L+ SS
Sbjct: 1114 RKSHRLTKPPAYLFEYHCNLLSSILSASNP-GKSPYPLSSVLSYDKCSPCHKRFCLSFSS 1172
Query: 581 *FEPRFYHEAVKYKEWRDAMHVELKAMKDNNTWSIVPLPAGKHFVGCKWVYK 736
EP+ Y +A K+ W AM EL A+ NTWS+V L GK +GCKWVYK
Sbjct: 1173 LTEPKTYKQACKFDCWNLAMKSELDALASTNTWSVVDLHEGKQPIGCKWVYK 1224
Score = 68.2 bits (165), Expect(3) = 4e-34
Identities = 39/101 (38%), Positives = 54/101 (53%)
Frame = +1
Query: 7 PGYTFFKVFGCLAFASTTPSHRTKLEPRARTCVFIG*PMGMKAYKMSDLDTCHVFCSRDV 186
P +VFGCL ++ST +HRTK PRAR +F+G G K Y + D + SR+V
Sbjct: 1000 PSLHHLRVFGCLVYSSTLHNHRTKFAPRARKSIFLGYREGTKGYLLYDPIIHEFYVSRNV 1059
Query: 187 VFHESVFPFRQVSRSTSVDDFPLASIPTASIHDDARCRDST 309
+FHE VFPF PLA+ P S++ D D++
Sbjct: 1060 IFHEIVFPFASP---------PLANNP-VSVNPDITTLDTS 1090
Score = 43.9 bits (102), Expect(3) = 4e-34
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +1
Query: 739 KHHADGSIERYKARLVAKGF 798
KHHADGSIERYKARLVAKG+
Sbjct: 1226 KHHADGSIERYKARLVAKGY 1245
>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
11.19) [Arabidopsis thaliana]
Length = 1633
Score = 79.3 bits (194), Expect(3) = 3e-30
Identities = 47/112 (41%), Positives = 63/112 (56%), Gaps = 10/112 (8%)
Frame = +1
Query: 1 QLPGYTFFKVFGCLAFASTTPSHRTKLEPRARTCVFIG*PMGMKAYKMSDLDTCHVFCSR 180
++P YT K CL +AST R K PRAR CVF+G P G K YK+ DL++ + +R
Sbjct: 713 KIPDYTLLK--SCLCYASTNVHDRNKFSPRARPCVFLGYPSGYKGYKVLDLESHSISITR 770
Query: 181 DVVFHESVFPFRQVS-RSTSVDDFPLASIP-TASIH--------DDARCRDS 306
+VVFHE+ FPF+ SVD FP + +P A +H DD R D+
Sbjct: 771 NVVFHETKFPFKTSKFLKESVDMFPNSILPLPAPLHFVESMPLDDDLRADDN 822
Score = 62.8 bits (151), Expect(3) = 3e-30
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 21/127 (16%)
Frame = +2
Query: 416 LRRSSKIRTKPSYLRDYHCNLV------------DIEDKSSK--------PYSLSKYV-L 532
+ R + P+YL +YHCN V IE SS PY +S +
Sbjct: 860 IARPKRNAKAPAYLSEYHCNSVPFLSSLSPTTSTSIETPSSSIPPKKITTPYPMSTAISY 919
Query: 533 *QVVLLSIRHILAISS*FEPRFYHEAVKYKEWRDAMHVELKAMKDNNTWSIVPLPAGKHF 712
++ L +I A + EP+ + +A+K ++W A + EL A++ N TW + L GK+
Sbjct: 920 DKLTPLFHSYICAYNVETEPKAFTQAMKSEKWTRAANEELHALEQNKTWIVESLTEGKNV 979
Query: 713 VGCKWVY 733
VGCKWV+
Sbjct: 980 VGCKWVF 986
Score = 36.6 bits (83), Expect(3) = 3e-30
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1
Query: 739 KHHADGSIERYKARLVAKGF 798
K++ DGSIERYKARLVA+GF
Sbjct: 989 KYNPDGSIERYKARLVAQGF 1008
>gb|AAD25830.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1015
Score = 72.4 bits (176), Expect(3) = 7e-29
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 422 RSSKIRTKPSYLRDYHCNLVDIEDKSSKPYSLSKYVL*QVVLLSIR-HILAISS*FEPRF 598
RS + +P++L+DY CNL + Y LS Y+ + R +I +++ EP
Sbjct: 577 RSKRESKQPAHLKDYFCNL----SRKGVQYPLSDYMSYDQLSTPYRAYICSVTKFSEPSS 632
Query: 599 YHEAVKYKEWRDAMHVELKAMKDNNTWSIVPLPAGKHFVGCKWVYK 736
+ +A K +W AM+ EL+A++ TW I LP+ K +GCKWVYK
Sbjct: 633 FFQAKKSDDWIKAMNAELQALEGTATWEICSLPSNKKAIGCKWVYK 678
Score = 68.2 bits (165), Expect(3) = 7e-29
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +1
Query: 49 ASTTPSHRTKLEPRARTCVFIG*PMGMKAYKMSDLDTCHVFCSRDVVFHESVFPFRQVSR 228
+ST+ +R K +PRA+ C+F+G P G K YK+ DL+T + SR+VVFHE+ FPF
Sbjct: 451 SSTSSKNRHKFQPRAKACIFLGYPSGYKGYKLLDLETKSIHISRNVVFHETRFPFSSGDS 510
Query: 229 STSVDDFPLASIPTASIHDDARCRDSTM 312
+ D SI + I +D DS +
Sbjct: 511 AGPFSDI-FGSINESLIENDTEIVDSNI 537
Score = 33.5 bits (75), Expect(3) = 7e-29
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +1
Query: 739 KHHADGSIERYKARLVAKGF 798
K + DG++ERYKARLVAKG+
Sbjct: 680 KLNVDGTLERYKARLVAKGY 699
>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
Length = 849
Score = 77.4 bits (189), Expect(3) = 4e-26
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Frame = +2
Query: 413 NLRRSSKIRTKPSYLRDY-----HCNLVDIEDKSSKPYSLSKYVL*QVVLLS-IRHILAI 574
+LRRS++ P +L D+ H + ++ P LS Y+ + + +
Sbjct: 613 DLRRSTRSSKPPGWLHDFVHIATHSPTSSLTCSTAHP--LSSYMSYSSISTPYFQSLCNF 670
Query: 575 SS*FEPRFYHEAVKYKEWRDAMHVELKAMKDNNTWSIVPLPAGKHFVGCKWVYK 736
S+ EP Y+EAV++ W AM +ELKA+ DN+TW +VPLP GK +GCKWVYK
Sbjct: 671 SAIPEPTSYNEAVQHSHWIQAMELELKALHDNHTWDLVPLPLGKKAIGCKWVYK 724
Score = 53.9 bits (128), Expect(3) = 4e-26
Identities = 30/95 (31%), Positives = 44/95 (46%)
Frame = +1
Query: 7 PGYTFFKVFGCLAFASTTPSHRTKLEPRARTCVFIG*PMGMKAYKMSDLDTCHVFCSRDV 186
P +V GCL +A +H K + R+ V +G K YK+ DL T F SRDV
Sbjct: 482 PSLHHLRVMGCLCYAVNHHTHGDKFDTRSIKSVLMGYSTTQKGYKLYDLSTQTFFISRDV 541
Query: 187 VFHESVFPFRQVSRSTSVDDFPLASIPTASIHDDA 291
F E +PF+ + + D P ++DD+
Sbjct: 542 TFREDQYPFQHIQDESC--DSSFFENPDMFVYDDS 574
Score = 33.5 bits (75), Expect(3) = 4e-26
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 739 KHHADGSIERYKARLVAKGF 798
K +A G +ERYKARLVAKG+
Sbjct: 726 KFNAQGEVERYKARLVAKGY 745