BLASTX nr result

ID: Atractylodes21_contig00021557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00021557
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528190.1| coatomer beta subunit, putative [Ricinus com...    70   1e-10
ref|XP_004158983.1| PREDICTED: coatomer subunit beta'-2-like [Cu...    69   5e-10
ref|XP_004149846.1| PREDICTED: coatomer subunit beta'-2-like [Cu...    69   5e-10
ref|XP_004141779.1| PREDICTED: coatomer subunit beta'-2-like [Cu...    69   5e-10
ref|NP_175645.1| coatomer subunit beta'-2 [Arabidopsis thaliana]...    69   5e-10

>ref|XP_002528190.1| coatomer beta subunit, putative [Ricinus communis]
           gi|223532402|gb|EEF34197.1| coatomer beta subunit,
           putative [Ricinus communis]
          Length = 351

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = +3

Query: 3   HTSYVKHITFNPRDTNVFISASNDGTIKTWNIGYASPRSSIECNQRTC-CVEFLNTDEKL 179
           H+ YV    FNPRD+  F SAS DGTIK WN+G  +P +++EC+ +   C+++L  D+KL
Sbjct: 189 HSHYVMQSIFNPRDSYTFASASLDGTIKIWNLGSPAPIATLECHSKGINCIDYLFNDDKL 248

Query: 180 YLVSGQSSCT 209
           +L+SG    T
Sbjct: 249 HLLSGSDDYT 258


>ref|XP_004158983.1| PREDICTED: coatomer subunit beta'-2-like [Cucumis sativus]
          Length = 907

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = +3

Query: 3   HTSYVKHITFNPRDTNVFISASNDGTIKTWNIGYASPRSSIECNQR-TCCVEFLNTDEKL 179
           H+ YV  +TFNP+DTN F SAS D TIK WN+G   P  +++ +Q+   CV++    +K 
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200

Query: 180 YLVSGQSSCTA 212
           YL++G    TA
Sbjct: 201 YLITGSDDHTA 211


>ref|XP_004149846.1| PREDICTED: coatomer subunit beta'-2-like [Cucumis sativus]
          Length = 915

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = +3

Query: 3   HTSYVKHITFNPRDTNVFISASNDGTIKTWNIGYASPRSSIECNQR-TCCVEFLNTDEKL 179
           H+ YV  +TFNP+DTN F SAS D TIK WN+G   P  +++ +Q+   CV++    +K 
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200

Query: 180 YLVSGQSSCTA 212
           YL++G    TA
Sbjct: 201 YLITGSDDHTA 211


>ref|XP_004141779.1| PREDICTED: coatomer subunit beta'-2-like [Cucumis sativus]
          Length = 907

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = +3

Query: 3   HTSYVKHITFNPRDTNVFISASNDGTIKTWNIGYASPRSSIECNQR-TCCVEFLNTDEKL 179
           H+ YV  +TFNP+DTN F SAS D TIK WN+G   P  +++ +Q+   CV++    +K 
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200

Query: 180 YLVSGQSSCTA 212
           YL++G    TA
Sbjct: 201 YLITGSDDHTA 211


>ref|NP_175645.1| coatomer subunit beta'-2 [Arabidopsis thaliana]
           gi|75169434|sp|Q9C827.1|COB22_ARATH RecName:
           Full=Coatomer subunit beta'-2; AltName: Full=Beta'-coat
           protein 2; Short=Beta'-COP 2
           gi|12323125|gb|AAG51545.1|AC037424_10 coatomer complex
           subunit, putative; 33791-27676 [Arabidopsis thaliana]
           gi|332194671|gb|AEE32792.1| coatomer subunit beta'-2
           [Arabidopsis thaliana]
          Length = 926

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = +3

Query: 3   HTSYVKHITFNPRDTNVFISASNDGTIKTWNIGYASPRSSIECNQR-TCCVEFLNTDEKL 179
           H+ YV  +TFNP+DTN F SAS D TIK WN+G   P  +++ +Q+   CV++    +K 
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200

Query: 180 YLVSGQSSCTA 212
           YL++G    TA
Sbjct: 201 YLITGSDDHTA 211


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