BLASTX nr result
ID: Atractylodes21_contig00021553
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00021553
(1712 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi... 699 0.0
ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|2... 615 e-173
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi... 610 e-172
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi... 600 e-169
ref|NP_680234.1| pentatricopeptide repeat-containing protein [Ar... 518 e-144
>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product
[Vitis vinifera]
Length = 765
Score = 699 bits (1803), Expect = 0.0
Identities = 345/556 (62%), Positives = 443/556 (79%), Gaps = 6/556 (1%)
Frame = -2
Query: 1711 DDARKLLCEMLESDAKFAPNETTLNIILPALLRWD-LGNEI--EKFLCFIPRFGVHGLFP 1541
DDA LL EML+ A+F PN T +I+ AL + D +G + E+ + + +F H +FP
Sbjct: 209 DDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFP 268
Query: 1540 SKIWLTQLITKLCRSYRSDKAWELLHELMKFGKV-EIASCNALLAGLGKQRDYERINLLL 1364
+ IWLTQLI++LCRS R+D+AW++LH LMK G V E ASCNALL LG+ R+++R+N LL
Sbjct: 269 NSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLL 328
Query: 1363 KEMKEHDIKPDIVTFGMLVNHLCKCLRVDEALDMLKTMKEG-NDVICIKPDVILYNTLID 1187
EMKE DI+P++VTFG+L+NHLCK RVDEAL++ + M G ++ ++PDVI YNTLID
Sbjct: 329 AEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLID 388
Query: 1186 GLCKVGRQEEGLVLMKQMKSEDNCVPNAITYNCLIDGFCKSGEIERAQALFDQMNKEGVD 1007
GLCKVGRQEEGL L+++M+S+ C+PN +TYNCLIDG+CK+ IE A+ LFDQMNK+GV
Sbjct: 389 GLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVP 448
Query: 1006 PNVITVNTLVDGMCKHGRISNAMEFFRKMQEEKDLKGNVVTYSALISAFCNVNNIEKAMT 827
PNV+T+NTLVDGMCKHGRI+ A+EFF +MQ K LKGN VTY+ALI AFCNVNNIEKAM
Sbjct: 449 PNVVTLNTLVDGMCKHGRINGAVEFFNEMQG-KGLKGNAVTYTALIRAFCNVNNIEKAME 507
Query: 826 LFEEMESVG-PPDALAYYSLISGLTKAGRPDDASFIASKMKKAGFRLDLVRYNTLIGGFC 650
LF+EM G PDA+ YY+LISGL++AG+ D ASF+ SKMK+AGF D+V +N LI GFC
Sbjct: 508 LFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFC 567
Query: 649 RKKKLDKAVEILKDMEESGVKADSVTYNSLISYFSQNGDFESAHKFLKQMIVDGNAPTLV 470
RK KLD+A E+LK+ME +G+K D VTYN+LIS+FS+ GDF +AH+ +K+M+ +G PT+V
Sbjct: 568 RKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVV 627
Query: 469 TFGTLIHAYCLAGNLDEALNIFKEMLTASKVPPNTVIYNILIDSLCKHGKVERALSLMDE 290
T+G LIHAYCL GNLDEA+ IF++M + SKVPPNTVIYNILI+SLC+ +V+ ALSLMD+
Sbjct: 628 TYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDD 687
Query: 289 MSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTNQACNPDYITMEILSDWLSAVGK 110
M KGV+PNT T+NAM KGL KN LS+A LMD+MT ACNPDYITMEIL++WLSAVG+
Sbjct: 688 MKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGE 747
Query: 109 VGKLKRFVQGYQVSSA 62
KLK FVQGY+VS++
Sbjct: 748 TAKLKSFVQGYEVSAS 763
Score = 194 bits (493), Expect = 6e-47
Identities = 139/514 (27%), Positives = 233/514 (45%), Gaps = 16/514 (3%)
Frame = -2
Query: 1519 LITKLCRSYRSDKAWELLHELMKFGKVE----------IASCNALLAGLGKQRDYERINL 1370
LI L R R D A LL E+++ K E + S + +G+ D E I
Sbjct: 198 LIDVLFRKGRVDDALHLLDEMLQ-PKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVG 256
Query: 1369 LLKEMKEHDIKPDIVTFGMLVNHLCKCLRVDEALDMLKTMKEGNDVICIKPDVILYNTLI 1190
L+ + EH++ P+ + L++ LC+ R D A D+L
Sbjct: 257 LVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLH---------------------- 294
Query: 1189 DGLCKVGRQEEGLVLMKQMKSEDNCVPNAITYNCLIDGFCKSGEIERAQALFDQMNKEGV 1010
GL K+G V A + N L+ ++ E +R L +M + +
Sbjct: 295 -GLMKLGG-----------------VMEAASCNALLTALGRAREFKRMNTLLAEMKEMDI 336
Query: 1009 DPNVITVNTLVDGMCKHGRISNAMEFFRKMQEEKD----LKGNVVTYSALISAFCNVNNI 842
PNV+T L++ +CK R+ A+E F KM + ++ +V+TY+ LI C V
Sbjct: 337 QPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQ 396
Query: 841 EKAMTLFEEMESVGP--PDALAYYSLISGLTKAGRPDDASFIASKMKKAGFRLDLVRYNT 668
E+ + L E M S P+ + Y LI G KA + A + +M K G ++V NT
Sbjct: 397 EEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNT 456
Query: 667 LIGGFCRKKKLDKAVEILKDMEESGVKADSVTYNSLISYFSQNGDFESAHKFLKQMIVDG 488
L+ G C+ +++ AVE +M+ G+K ++VTY +LI F + E A + +M+ G
Sbjct: 457 LVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAG 516
Query: 487 NAPTLVTFGTLIHAYCLAGNLDEALNIFKEMLTASKVPPNTVIYNILIDSLCKHGKVERA 308
+P + + TLI AG LD A + +M A P+ V +N+LI+ C+ K++ A
Sbjct: 517 CSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG-FSPDIVSFNVLINGFCRKNKLDEA 575
Query: 307 LSLMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTNQACNPDYITMEILSDW 128
++ EM G++P+ TYN ++ S S A RLM +M + P +T L
Sbjct: 576 YEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHA 635
Query: 127 LSAVGKVGKLKRFVQGYQVSSAI*KSGGMYSSLV 26
G + + + + +S + + +Y+ L+
Sbjct: 636 YCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILI 669
Score = 157 bits (396), Expect = 1e-35
Identities = 125/507 (24%), Positives = 215/507 (42%), Gaps = 86/507 (16%)
Frame = -2
Query: 1279 DEALDMLKTMKEGNDVICIKPDVILYNTLIDGLCKVGRQEEGLVLMKQMKSEDNCVPNAI 1100
++ LD+ KT K + + +L I + +E ++ ++ C +
Sbjct: 141 NKLLDLFKTSKSHKIPLSVNAATLL----IRCFGRAQMVDESFLVYNEL-----CPSRRL 191
Query: 1099 TY--NCLIDGFCKSGEIERAQALFDQM------------------------NKEG----- 1013
T+ N LID + G ++ A L D+M +K G
Sbjct: 192 THIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDE 251
Query: 1012 --------------VDPNVITVNTLVDGMCKHGRISNAMEF------------------- 932
V PN I + L+ +C+ GR A +
Sbjct: 252 EEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNAL 311
Query: 931 ---------FRKM------QEEKDLKGNVVTYSALISAFCNVNNIEKAMTLFEEM---ES 806
F++M +E D++ NVVT+ LI+ C +++A+ +FE+M ES
Sbjct: 312 LTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGES 371
Query: 805 VG---PPDALAYYSLISGLTKAGRPDDASFIASKMKKAGFRL-DLVRYNTLIGGFCRKKK 638
G PD + Y +LI GL K GR ++ + +M+ + + V YN LI G+C+
Sbjct: 372 NGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASM 431
Query: 637 LDKAVEILKDMEESGVKADSVTYNSLISYFSQNGDFESAHKFLKQMIVDGNAPTLVTFGT 458
++ A E+ M + GV + VT N+L+ ++G A +F +M G VT+
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491
Query: 457 LIHAYCLAGNLDEALNIFKEMLTASKVPPNTVIYNILIDSLCKHGKVERALSLMDEMSGK 278
LI A+C N+++A+ +F EML A P+ ++Y LI L + GK++RA ++ +M
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAG-CSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEA 550
Query: 277 GVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTNQACNPDYITMEILSDWLSAVGKVGKL 98
G P+ ++N ++ G KN L EA ++ +M N PD +T L S G
Sbjct: 551 GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA 610
Query: 97 KRFVQGYQVSSAI*KSGGMYSSLVRCY 17
R ++ V + + Y +L+ Y
Sbjct: 611 HRLMK-KMVKEGLVPTVVTYGALIHAY 636
>ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|222861600|gb|EEE99142.1|
predicted protein [Populus trichocarpa]
Length = 775
Score = 615 bits (1586), Expect = e-173
Identities = 303/560 (54%), Positives = 423/560 (75%), Gaps = 11/560 (1%)
Frame = -2
Query: 1708 DARKLLCEMLES--DAKFAPNETTLNIILPALLRWDLGNEI---EKFLCFIPRFGVHGLF 1544
DA K++ EM ES D+ PN+ T +I+ LL+ + E+ ++ + + +FG HG+
Sbjct: 208 DALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVL 267
Query: 1543 PSKIWLTQLITKLCRSYRSDKAWELLHELMKFGKV-EIASCNALLAGLGKQRDYERINLL 1367
S W+ +LIT+LCR+ ++++ W+L E++K G V E A+CN+LL GL ++ ++ R+N L
Sbjct: 268 ISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNEL 327
Query: 1366 LKEMKEHDIKPDIVTFGMLVNHLCKCLRVDEALDMLKTMKEGNDV----ICIKPDVILYN 1199
+++M E DI+P++VTFG+L+NH+CK RVD+AL++L+ M G + + ++PDV++YN
Sbjct: 328 MEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYN 387
Query: 1198 TLIDGLCKVGRQEEGLVLMKQMKSEDNCVPNAITYNCLIDGFCKSGEIERAQALFDQMNK 1019
TLIDGLCKVGRQ+EGL LM++M+S+ C P+ ITYNCLIDGFCK+GEIE+ + LFD+MNK
Sbjct: 388 TLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNK 447
Query: 1018 EGVDPNVITVNTLVDGMCKHGRISNAMEFFRKMQEEKDLKGNVVTYSALISAFCNVNNIE 839
EGV PNV+TVNTLV GMC+ GR+S+A+ FF + Q + +KG+ VTY+ALI+AFCNVNN E
Sbjct: 448 EGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQR-RGMKGDAVTYTALINAFCNVNNFE 506
Query: 838 KAMTLFEEMESVG-PPDALAYYSLISGLTKAGRPDDASFIASKMKKAGFRLDLVRYNTLI 662
KAM LF EM G PDA+ YY+LISG ++AGR DASF+ +++KK G R D V YNTLI
Sbjct: 507 KAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLI 566
Query: 661 GGFCRKKKLDKAVEILKDMEESGVKADSVTYNSLISYFSQNGDFESAHKFLKQMIVDGNA 482
GGFCR K + E+LK+MEE+G+K D++TYN+LI+Y S+NGD + A K +++MI G
Sbjct: 567 GGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVV 626
Query: 481 PTLVTFGTLIHAYCLAGNLDEALNIFKEMLTASKVPPNTVIYNILIDSLCKHGKVERALS 302
PT+ T+G +I+AYCL GN +EA+ IFK+M ASKVPPNTVIYNILI+SLCK+ KV+ A+S
Sbjct: 627 PTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVS 686
Query: 301 LMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTNQACNPDYITMEILSDWLS 122
LM++M GV PNTTTYNA+ KGL + L + MD+M ACNPDYITMEIL++WLS
Sbjct: 687 LMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLS 746
Query: 121 AVGKVGKLKRFVQGYQVSSA 62
AVG++ +LK+FV G +VSS+
Sbjct: 747 AVGEIERLKKFVAGCEVSSS 766
Score = 126 bits (317), Expect = 2e-26
Identities = 100/375 (26%), Positives = 170/375 (45%), Gaps = 23/375 (6%)
Frame = -2
Query: 1162 EEGLVLMKQMKSEDNCVPNAITYNCLIDGFCKSGEIERAQALFDQMNKEGVD----PNVI 995
EE L+L + D V N N + +SG ++ A + D+M + D PN
Sbjct: 174 EESLILFNDL---DPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDA 230
Query: 994 TVNTLVDGMCKHGRISNAMEFFRKMQEEKDLKGNVVTYSALISAF---------CNVNNI 842
T + L + K R E E +L + LIS+F C
Sbjct: 231 TGDILFSFLLKRER----NEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKT 286
Query: 841 EKAMTLFEEMESVGPP-DALAYYSLISGLTKAGRPDDASFIASKMKKAGFRLDLVRYNTL 665
+ LF EM +G ++ A SL++GL + G + + + KM + + ++V + L
Sbjct: 287 NRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGIL 346
Query: 664 IGGFCRKKKLDKAVEILKDM---EESG-----VKADSVTYNSLISYFSQNGDFESAHKFL 509
I C+ +++D A+E+L+ M +ESG V+ D V YN+LI + G + +
Sbjct: 347 INHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLM 406
Query: 508 KQM-IVDGNAPTLVTFGTLIHAYCLAGNLDEALNIFKEMLTASKVPPNTVIYNILIDSLC 332
++M G AP +T+ LI +C AG +++ +F EM V PN V N L+ +C
Sbjct: 407 ERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEM-NKEGVAPNVVTVNTLVGGMC 465
Query: 331 KHGKVERALSLMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTNQACNPDYI 152
+ G+V A++ E +G++ + TY A++ N +A+ L ++M C+PD I
Sbjct: 466 RTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAI 525
Query: 151 TMEILSDWLSAVGKV 107
L S G++
Sbjct: 526 VYYTLISGFSQAGRM 540
>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 610 bits (1572), Expect = e-172
Identities = 315/553 (56%), Positives = 410/553 (74%), Gaps = 9/553 (1%)
Frame = -2
Query: 1711 DDARKLLCEMLESDAKFAPNETTLNIILPALLRWD-LGNEI--EKFLCFIPRFGVHGLFP 1541
D+A +L EML +++F PN+ T I+ LL+ D L + ++ + +FG H +FP
Sbjct: 56 DNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFP 115
Query: 1540 SKIWLTQLITKLCRSYRSDKAWELLHELMKF-GKVEIASCNALLAGLGKQRDYERINLLL 1364
I LTQLI+KLCRS ++ AW +L LM G + A CNALL GLGK R++ ++NLL+
Sbjct: 116 DTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLM 175
Query: 1363 KEMKEHDIKPDIVTFGMLVNHLCKCLRVDEALDMLKTMKEGNDV--ICIKPDVILYNTLI 1190
++MK+ +I+P ++TFG+L+NHLCK R+D+AL++ + MK + + + PD I+YNTLI
Sbjct: 176 RKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLI 235
Query: 1189 DGLCKVGRQEEGLVLMKQMKSEDNCVPNAITYNCLIDGFCKSGEIERAQALFDQMNKEGV 1010
DGLCKVGRQEE L LM +M+S D C P T+NCLI+G+C+SGEIE A LF++M +
Sbjct: 236 DGLCKVGRQEEALCLMGKMRS-DQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQI 294
Query: 1009 DPNVITVNTLVDGMCKHGRISNAMEFFRKMQEEKDLKGNVVTYSALISAFCNVNNIEKAM 830
+PNVIT+NTLVDGMCKH RIS A+EFFR MQ+ K LKGN VTY+ I+AFCNVNN+ KAM
Sbjct: 295 EPNVITLNTLVDGMCKHNRISTAVEFFRVMQQ-KGLKGNNVTYTVFINAFCNVNNMNKAM 353
Query: 829 TLFEEMESVGP-PDALAYYSLISGLTKAGRPDDASFIASKMKKAGFRLDLVRYNTLIGGF 653
+EM G PDA+ YY+LI GL +AGR DDAS + SK+K+AGF LD V YN LI F
Sbjct: 354 EFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEF 413
Query: 652 CRKKKLDKAVEILKDMEESGVKADSVTYNSLISYFSQNGDFESAHKFLKQMIVD-GNAPT 476
C+K KLD+A E L +ME +GVK DSVTYN+LISYFS+ G+F+ AHKF+K+M + G +PT
Sbjct: 414 CKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPT 473
Query: 475 LVTFGTLIHAYCLAGNLDEALNIFKEMLT-ASKVPPNTVIYNILIDSLCKHGKVERALSL 299
+ T+G LIHAYCL N+DEA+ IFKEM ASKVPPNTVIYNILIDSLCK +V ALSL
Sbjct: 474 VFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSL 533
Query: 298 MDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTNQACNPDYITMEILSDWLSA 119
+D+M +GV PNTTTYN++ K L KN L +A +LMD+M QACNPDYITMEIL++WLSA
Sbjct: 534 LDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSA 593
Query: 118 VGKVGKLKRFVQG 80
VG++ KLK+F QG
Sbjct: 594 VGEITKLKKFTQG 606
Score = 155 bits (393), Expect = 2e-35
Identities = 113/447 (25%), Positives = 206/447 (46%), Gaps = 15/447 (3%)
Frame = -2
Query: 1312 LVNHLCKCLRVDEALDMLKTMK------EGNDVICIKPDVILYNTL--IDGLCKVGRQEE 1157
++N L K RVD A+++L M ND K I++N L IDGL +++E
Sbjct: 45 IINLLLKSGRVDNAMNVLDEMLLPESEFRPND----KTAGIVFNNLLKIDGLEGRVKEDE 100
Query: 1156 GLVLMKQMKSEDNCVPNAITYNCLIDGFCKSGEIERAQALFDQMNKEGVDPNVITVNTLV 977
L+ + + N P+ I LI C+SG A + D + + N L+
Sbjct: 101 IAGLVSKF-GKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALL 159
Query: 976 DGMCKHGRISNAMEFFRKMQEEKDLKGNVVTYSALISAFCNVNNIEKAMTLFEEMESVGP 797
G+ K RKM++ +++ V+T+ LI+ C I+ A+ +FE+M+
Sbjct: 160 TGLGKAREFGKMNLLMRKMKD-MNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKE 218
Query: 796 -------PDALAYYSLISGLTKAGRPDDASFIASKMKKAGFRLDLVRYNTLIGGFCRKKK 638
PD + Y +LI GL K GR ++A + KM+ +N LI G+CR +
Sbjct: 219 ETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGE 278
Query: 637 LDKAVEILKDMEESGVKADSVTYNSLISYFSQNGDFESAHKFLKQMIVDGNAPTLVTFGT 458
++ A ++ +ME + ++ + +T N+L+ ++ +A +F + M G VT+
Sbjct: 279 IEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTV 338
Query: 457 LIHAYCLAGNLDEALNIFKEMLTASKVPPNTVIYNILIDSLCKHGKVERALSLMDEMSGK 278
I+A+C N+++A+ EM + P+ V+Y LI L + G+++ A S++ ++
Sbjct: 339 FINAFCNVNNMNKAMEFLDEM-SKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEA 397
Query: 277 GVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTNQACNPDYITMEILSDWLSAVGKVGKL 98
G + YN ++ KN L A +++M PD +T L + S +G
Sbjct: 398 GFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLA 457
Query: 97 KRFVQGYQVSSAI*KSGGMYSSLVRCY 17
+F++ + + Y +L+ Y
Sbjct: 458 HKFMKKMTEEEGLSPTVFTYGALIHAY 484
Score = 143 bits (360), Expect = 2e-31
Identities = 100/381 (26%), Positives = 177/381 (46%), Gaps = 18/381 (4%)
Frame = -2
Query: 1195 LIDGLCKVGRQEEGLVLMKQMKSEDNCVPNAITYNCLIDGFCKSGEIERAQALFDQM--N 1022
L+ L ++G +E L + D+ N N +I+ KSG ++ A + D+M
Sbjct: 12 LLRRLGRIGMVDEALAAFSTL---DSHAKNTNVRNEIINLLLKSGRVDNAMNVLDEMLLP 68
Query: 1021 KEGVDPNVITVNTL---------VDGMCKHGRISNAMEFFRKMQEEKDLKGNVVTYSALI 869
+ PN T + ++G K I+ + F K ++ + + + LI
Sbjct: 69 ESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGK----HNIFPDTIALTQLI 124
Query: 868 SAFCNVNNIEKAMTLFEEMESV-GPPDALAYYSLISGLTKAGRPDDASFIASKMKKAGFR 692
S C N A + + + + G DA +L++GL KA + + KMK +
Sbjct: 125 SKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQ 184
Query: 691 LDLVRYNTLIGGFCRKKKLDKAVEILKDM----EESG--VKADSVTYNSLISYFSQNGDF 530
++ + LI C+ +++D A+E+ + M EE+ V D++ YN+LI + G
Sbjct: 185 PTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQ 244
Query: 529 ESAHKFLKQMIVDGNAPTLVTFGTLIHAYCLAGNLDEALNIFKEMLTASKVPPNTVIYNI 350
E A + +M D APT TF LI+ YC +G ++ A +F EM A ++ PN + N
Sbjct: 245 EEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENA-QIEPNVITLNT 303
Query: 349 LIDSLCKHGKVERALSLMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTNQA 170
L+D +CKH ++ A+ M KG++ N TY + N +++A+ +D+M+
Sbjct: 304 LVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDG 363
Query: 169 CNPDYITMEILSDWLSAVGKV 107
C PD + L L+ G++
Sbjct: 364 CFPDAVVYYTLICGLAQAGRL 384
Score = 117 bits (292), Expect = 1e-23
Identities = 90/358 (25%), Positives = 155/358 (43%), Gaps = 6/358 (1%)
Frame = -2
Query: 1063 GEIERAQALFDQMNKEGVDPNVITVNTLVDGMCKHGRISNAMEFFRKMQ-EEKDLKGNVV 887
G ++ A A F ++ + NV N +++ + K GR+ NAM +M E + + N
Sbjct: 20 GMVDEALAAFSTLDSHAKNTNVR--NEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDK 77
Query: 886 TYSALISAFCNVNNIEKAMTLFEEMESVGPPDALAYYSLISGLTKAGRPDDASFIASKMK 707
T + NN+ K I GL + D+ + + SK
Sbjct: 78 TAGIVF------NNLLK----------------------IDGLEGRVKEDEIAGLVSKFG 109
Query: 706 KAGFRLDLVRYNTLIGGFCRKKKLDKAVEILKDMEESGVKADSVTYNSLISYFSQNGDFE 527
K D + LI CR + A IL ++ D+ N+L++ + +F
Sbjct: 110 KHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFG 169
Query: 526 SAHKFLKQMIVDGNAPTLVTFGTLIHAYCLAGNLDEALNIFKEML-----TASKVPPNTV 362
+ +++M PT++TFG LI+ C +D+AL +F++M T V P+T+
Sbjct: 170 KMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTI 229
Query: 361 IYNILIDSLCKHGKVERALSLMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQM 182
+YN LID LCK G+ E AL LM +M P T T+N ++ G + A +L ++M
Sbjct: 230 MYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEM 289
Query: 181 TNQACNPDYITMEILSDWLSAVGKVGKLKRFVQGYQVSSAI*KSGGMYSSLVRCYSNI 8
N P+ IT+ L D + ++ F + Q + + Y+ + + N+
Sbjct: 290 ENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQ-QKGLKGNNVTYTVFINAFCNV 346
>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 600 bits (1548), Expect = e-169
Identities = 305/552 (55%), Positives = 406/552 (73%), Gaps = 4/552 (0%)
Frame = -2
Query: 1708 DARKLLCEMLESDAKFAPNETTLNIILPALLRWDLGNEIEKFLCFIPRFGVHGLFPSKIW 1529
DA +L EM ++++ F+ T I+ L+R + + + + G G+FP
Sbjct: 192 DALHVLDEMPQANSGFS---VTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFK 248
Query: 1528 LTQLITKLCRSYRSDKAWELLHELMKFG-KVEIASCNALLAGLGKQRDYERINLLLKEMK 1352
LTQL+ KLC ++ AWE+LH +M+ G V+ ASCNALL LG+ RD +R+N LL EM+
Sbjct: 249 LTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEME 308
Query: 1351 EHDIKPDIVTFGMLVNHLCKCLRVDEALDMLKTM--KEGNDVICIKPDVILYNTLIDGLC 1178
+ I+P +VTFG+LVNHLCK R+DEAL + + K G++ + ++PDV+L+NTLIDGLC
Sbjct: 309 KRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLC 368
Query: 1177 KVGRQEEGLVLMKQMKSEDNCVPNAITYNCLIDGFCKSGEIERAQALFDQMNKEGVDPNV 998
KVG++E+GL L+++MK + PN +TYNCLIDGF K+G +RA LF QMN+EGV PNV
Sbjct: 369 KVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNV 428
Query: 997 ITVNTLVDGMCKHGRISNAMEFFRKMQEEKDLKGNVVTYSALISAFCNVNNIEKAMTLFE 818
IT+NTLVDG+CKHGR+ A+EFF +M+ K LKGN TY+ALISAFC VNNI +AM FE
Sbjct: 429 ITLNTLVDGLCKHGRVHRAVEFFNEMKG-KGLKGNAATYTALISAFCGVNNINRAMQCFE 487
Query: 817 EMESVG-PPDALAYYSLISGLTKAGRPDDASFIASKMKKAGFRLDLVRYNTLIGGFCRKK 641
EM S G PDA+ YYSLISGL AGR +DAS + SK+K AGF LD YN LI GFC+KK
Sbjct: 488 EMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKK 547
Query: 640 KLDKAVEILKDMEESGVKADSVTYNSLISYFSQNGDFESAHKFLKQMIVDGNAPTLVTFG 461
KL++ E+L +MEE+GVK D++TYN+LISY + GDF +A K +++MI +G P++VT+G
Sbjct: 548 KLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYG 607
Query: 460 TLIHAYCLAGNLDEALNIFKEMLTASKVPPNTVIYNILIDSLCKHGKVERALSLMDEMSG 281
+IHAYC N+DE + IF EM + SKVPPNTVIYNILID+LC++ V+RA+SLM++M
Sbjct: 608 AIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKV 667
Query: 280 KGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTNQACNPDYITMEILSDWLSAVGKVGK 101
K VRPNTTTYNA+LKG+ K ML +A LMD+M +AC PDYITME+L++WLSAVG++ K
Sbjct: 668 KRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK 727
Query: 100 LKRFVQGYQVSS 65
LK FV+GYQ SS
Sbjct: 728 LKHFVEGYQDSS 739
>ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g28460 gi|9502149|gb|AAF88002.1| contains similarity
to Pfam family PF01535 (Domain of unknown function),
score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120
[Arabidopsis thaliana] gi|27363272|gb|AAO11555.1|
At5g28460/F21B23_120 [Arabidopsis thaliana]
gi|332006418|gb|AED93801.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 518 bits (1334), Expect = e-144
Identities = 273/553 (49%), Positives = 378/553 (68%), Gaps = 4/553 (0%)
Frame = -2
Query: 1711 DDARKLLCEMLESDAKFAPNETTLNIILPALLRWDLGNEIEKFLCFIPRFGVHGLFPSKI 1532
DDA K+L EML+ ++ F PN T +I+L + + L E EK + I RF HG+ P+ +
Sbjct: 202 DDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTE-EKIIALISRFSSHGVSPNSV 260
Query: 1531 WLTQLITKLCRSYRSDKAWELLHELMKFGK-VEIASCNALLAGLGKQRDYERINLLLKEM 1355
WLT+ I+ LC++ R++ AW++L +LMK +E NALL+ LG+ D R+N L+ +M
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 1354 KEHDIKPDIVTFGMLVNHLCKCLRVDEALDMLKTM--KEGNDVICIKPDVILYNTLIDGL 1181
E I+PD+VT G+L+N LCK RVDEAL++ + M K +D IK D I +NTLIDGL
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 1180 CKVGRQEEGLVLMKQMKSEDNCVPNAITYNCLIDGFCKSGEIERAQALFDQMNKEGVDPN 1001
CKVGR +E L+ +MK E+ CVPNA+TYNCLIDG+C++G++E A+ + +M ++ + PN
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
Query: 1000 VITVNTLVDGMCKHGRISNAMEFFRKMQEEKDLKGNVVTYSALISAFCNVNNIEKAMTLF 821
V+TVNT+V GMC+H ++ A+ FF M++E +KGNVVTY LI A C+V+N+EKAM +
Sbjct: 441 VVTVNTIVGGMCRHHGLNMAVVFFMDMEKE-GVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 820 EEMESVG-PPDALAYYSLISGLTKAGRPDDASFIASKMKKAGFRLDLVRYNTLIGGFCRK 644
E+M G PDA YY+LISGL + R DA + K+K+ GF LDL+ YN LIG FC K
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK 559
Query: 643 KKLDKAVEILKDMEESGVKADSVTYNSLISYFSQNGDFESAHKFLKQMIVDGNAPTLVTF 464
+K E+L DME+ G K DS+TYN+LIS+F ++ DFES + ++QM DG PT+ T+
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 463 GTLIHAYCLAGNLDEALNIFKEMLTASKVPPNTVIYNILIDSLCKHGKVERALSLMDEMS 284
G +I AYC G LDEAL +FK+M SKV PNTVIYNILI++ K G +ALSL +EM
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 283 GKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTNQACNPDYITMEILSDWLSAVGKVG 104
K VRPN TYNA+ K L+ K L+LMD+M Q+C P+ ITMEIL + LS ++
Sbjct: 680 MKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELV 739
Query: 103 KLKRFVQGYQVSS 65
KL++F+QGY V+S
Sbjct: 740 KLRKFMQGYSVAS 752
Score = 165 bits (418), Expect = 3e-38
Identities = 104/413 (25%), Positives = 196/413 (47%), Gaps = 7/413 (1%)
Frame = -2
Query: 1225 IKPDVILYNTLIDGLCKVGRQEEGLVLMKQMKSEDNCVPNAITYNCLIDGFCKSGEIERA 1046
+ P+ + I LCK R ++ + + A +N L+ ++ +I R
Sbjct: 255 VSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPL-EAPPFNALLSCLGRNMDISRM 313
Query: 1045 QALFDQMNKEGVDPNVITVNTLVDGMCKHGRISNAMEFFRKMQEEKDLKGNVVT-----Y 881
L +M++ + P+V+T+ L++ +CK R+ A+E F +M+ ++ GNV+ +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 880 SALISAFCNVNNIEKAMTLFEEM--ESVGPPDALAYYSLISGLTKAGRPDDASFIASKMK 707
+ LI C V +++A L M E P+A+ Y LI G +AG+ + A + S+MK
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 706 KAGFRLDLVRYNTLIGGFCRKKKLDKAVEILKDMEESGVKADSVTYNSLISYFSQNGDFE 527
+ + ++V NT++GG CR L+ AV DME+ GVK + VTY +LI + E
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 526 SAHKFLKQMIVDGNAPTLVTFGTLIHAYCLAGNLDEALNIFKEMLTASKVPPNTVIYNIL 347
A + ++M+ G +P + LI C +A+ + E L + + YN+L
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV-EKLKEGGFSLDLLAYNML 552
Query: 346 IDSLCKHGKVERALSLMDEMSGKGVRPNTTTYNAMLKGLSTKNMLSEALRLMDQMTNQAC 167
I C E+ ++ +M +G +P++ TYN ++ R+M+QM
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 166 NPDYITMEILSDWLSAVGKVGKLKRFVQGYQVSSAI*KSGGMYSSLVRCYSNI 8
+P T + D +VG++ + + + + S + + +Y+ L+ +S +
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665